DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and npbwr1

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_031750555.1 Gene:npbwr1 / 100487226 XenbaseID:XB-GENE-984596 Length:329 Species:Xenopus tropicalis


Alignment Length:323 Identity:110/323 - (34%)
Similarity:183/323 - (56%) Gaps:20/323 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 HRNRPTQQNGSHYLEYDDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQT 178
            |.|  |..:||     .:..||        ..::..|:||::|::||.|||.||||:::..||:|
 Frog    22 HAN--TSHHGS-----SEMSPD--------FYIVLPIIYAIICVVGLTGNTAVIYVILKAPKMKT 71

  Fly   179 VTNIYILNLAIADECFLIGIPFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRY 243
            |||::||||||||:.|.:.:|..:..:.:..||||..:||..:.......|:|..||.:||.|||
 Frog    72 VTNLFILNLAIADDLFTLVLPINIAEILLHYWPFGVVLCKVILSIDLYNIFSSIYFLTVMSIDRY 136

  Fly   244 IAVCHPISSPR--YRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPDTQNSH 306
            :.|...:.|.|  |||...:|::|...|:..::::||..:||..........||.:.:|..:...
 Frog   137 LVVLATVRSKRMPYRTYRAAKVISLLVWLLVIIIVLPFTIFAGVYMDDMDFKSCGLNFPKPEKLW 201

  Fly   307 TDSTFILYSLVLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFC 371
            ..::.| |:|:||||.|::.|.|.|.:::.||..:.....:|...::.::||.:|..|::..:||
 Frog   202 FKASRI-YTLLLGFAIPVSTICVLYMVMLYKLRNMRLNSNAKALDKAKKRVTVMVFVVVAVCLFC 265

  Fly   372 WLPHWISQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTC 434
            |.|..::.:..:::..|..:..:.::.|:.  .|||:||.:||.|||||.|:|:|||.|...|
 Frog   266 WTPFHLATIVSLTTDLQETSLVIGISYFIT--SLSYANSCLNPFLYAFLDDSFRKSFRKLLEC 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 76/217 (35%)
7tm_1 162..417 CDD:278431 85/256 (33%)
npbwr1XP_031750555.1 7tmA_NPBWR 39..320 CDD:320215 99/283 (35%)
TM helix 1 41..65 CDD:320215 13/23 (57%)
TM helix 2 74..95 CDD:320215 11/20 (55%)
TM helix 3 111..133 CDD:320215 6/21 (29%)
TM helix 4 158..174 CDD:320215 3/15 (20%)
TM helix 5 203..226 CDD:320215 10/23 (43%)
TM helix 6 252..274 CDD:320215 7/21 (33%)
TM helix 7 288..313 CDD:320215 12/26 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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