DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and galr2

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_002940025.1 Gene:galr2 / 100486593 XenbaseID:XB-GENE-921716 Length:373 Species:Xenopus tropicalis


Alignment Length:306 Identity:101/306 - (33%)
Similarity:157/306 - (51%) Gaps:33/306 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLI-GIPF--LLYTMQVGNWP 211
            :||:|:.::|..||:||:.|::|..|:...||::||||.:||.||:| .:||  .:||:.  :|.
 Frog    22 VLYSLIFLVGTVGNSLVLAVLLRNGKVNNTTNLFILNLGVADLCFIIFCVPFQATIYTLD--SWV 84

  Fly   212 FGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLLM 276
            ||.:||||......:|.:.||..|..:|.|||:|:.:|:.|...|||..:.|.....|..|::..
 Frog    85 FGPFMCKAVHFFIYLTMYASSFTLTTVSLDRYLAIRYPLRSRELRTPKNALLAITLIWSLSLVFS 149

  Fly   277 LPVILFASTVQSSNGNVSCNIEWPDTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIRKLHT- 340
            .|.:.:....|.||..| |:..|.|:.....|.....:|.|:    |:..:.:.|...||.|.| 
 Frog   150 GPYLSYYQEFQLSNLTV-CHPVWQDSYRRAMDLCTFAFSYVI----PVLILSLTYARTIRYLWTA 209

  Fly   341 VGPKHKSKEKKRSHRKVTKLVLTVISAYIFCWLPH-------WISQVALISSAPQRCASRLELAV 398
            |.|.....|.||:.|:||::::.|...:..|||||       |.....|         :....|:
 Frog   210 VDPIEDMSESKRAKRRVTRMIIIVAVLFCLCWLPHHLVILCVWFGYFPL---------NNFTYAL 265

  Fly   399 FLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTC------AARK 438
            .:....:||:||.:||::||.:|.:|:|.|.|...|      ||.|
 Frog   266 RILSHLVSYANSCVNPVVYALVSKHFRKGFRKIFRCLLLRQRAANK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 95/288 (33%)
TM helix 1 147..173 CDD:320222 9/22 (41%)
TM helix 2 180..206 CDD:320222 15/28 (54%)
TM helix 3 217..247 CDD:320222 12/29 (41%)
TM helix 4 259..281 CDD:320222 4/21 (19%)
TM helix 5 308..337 CDD:320222 6/28 (21%)
TM helix 6 352..382 CDD:320222 11/36 (31%)
TM helix 7 396..421 CDD:320222 9/24 (38%)
galr2XP_002940025.1 7tmA_Gal2_Gal3_R 18..295 CDD:320225 95/288 (33%)
TM helix 1 19..45 CDD:320225 9/22 (41%)
TM helix 2 52..78 CDD:320225 13/25 (52%)
TM helix 3 90..120 CDD:320225 12/29 (41%)
TM helix 4 132..152 CDD:320225 3/19 (16%)
TM helix 5 176..205 CDD:320225 6/32 (19%)
TM helix 6 221..251 CDD:320225 10/29 (34%)
TM helix 7 263..288 CDD:320225 9/24 (38%)

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