DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and sstr2a

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_005170178.1 Gene:sstr2a / 100333578 ZFINID:ZDB-GENE-140130-1 Length:379 Species:Danio rerio


Alignment Length:319 Identity:123/319 - (38%)
Similarity:192/319 - (60%) Gaps:22/319 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 NGSHYLEYDDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILN 186
            ||:|        |...::.:.::..:    |.:||.:||.||.|||||::|::||:|||||||||
Zfish    39 NGTH--------PGFDHTSSVVITFV----YFVVCAVGLCGNALVIYVILRYAKMKTVTNIYILN 91

  Fly   187 LAIADECFLIGIPFLLYTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAVCHPIS 251
            ||:||...::.:||:...:.:.:||||:.:|:..:...|:..|||..||.:||.|||:||.|||.
Zfish    92 LAVADVLCMLSLPFIAIQLSLLHWPFGSAICRVVLTVDSMNQFTSIFFLTVMSFDRYLAVVHPIK 156

  Fly   252 SPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPDTQNSHTDSTFILYSL 316
            |.::|.|.::|.:|...|..::|:.||:::::......|...:|.:.||:.||::. :.||.|:.
Zfish   157 STKWRKPRMAKTISLGMWSVALLVNLPIMIYSGVNAKKNEARTCTMLWPEPQNTYY-TAFIFYTF 220

  Fly   317 VLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCWLPHWISQVA 381
            .|||..||..|.:.|.|::.|:.:.|.:..|.::|||.||||::|..|:..::.||||.::..|.
Zfish   221 FLGFFLPLIVISMCYLLIVIKVKSSGMRVGSTKRKRSERKVTRMVSIVVVVFVLCWLPFYVFNVT 285

  Fly   382 LIS-SAPQR--CASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAAR 437
            .:: :.|..  ..|..:..|     .|.|:||..||||||||||||||||... .|..|
Zfish   286 SVTGTVPTTPVLKSTFDFVV-----VLGYANSCANPILYAFLSDNFKKSFQNV-LCLKR 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 115/284 (40%)
TM helix 1 147..173 CDD:320222 12/25 (48%)
TM helix 2 180..206 CDD:320222 13/25 (52%)
TM helix 3 217..247 CDD:320222 13/29 (45%)
TM helix 4 259..281 CDD:320222 6/21 (29%)
TM helix 5 308..337 CDD:320222 11/28 (39%)
TM helix 6 352..382 CDD:320222 13/29 (45%)
TM helix 7 396..421 CDD:320222 12/24 (50%)
sstr2aXP_005170178.1 7tm_GPCRs 51..330 CDD:475119 115/288 (40%)
TM helix 1 53..77 CDD:320637 12/27 (44%)
TM helix 2 86..107 CDD:320637 12/20 (60%)
TM helix 3 123..145 CDD:320637 7/21 (33%)
TM helix 4 168..184 CDD:320637 4/15 (27%)
TM helix 5 213..236 CDD:320637 9/22 (41%)
TM helix 6 262..284 CDD:320637 7/21 (33%)
TM helix 7 298..323 CDD:320637 13/29 (45%)

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