DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and cckbra

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_001108186.2 Gene:cckbra / 100137117 ZFINID:ZDB-GENE-060503-482 Length:444 Species:Danio rerio


Alignment Length:439 Identity:107/439 - (24%)
Similarity:196/439 - (44%) Gaps:130/439 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SVESESYPSINGT-QNETMVTSVRPHLDHRNRPTQQNGSHYLEYDDDGPDCSYSYNFILKLITMI 150
            |||      :|.| .|.:::...:|     .||.:.:.                       :.:|
Zfish    31 SVE------VNATCSNASIIQKFKP-----TRPKEMDS-----------------------VRII 61

  Fly   151 LYALVCIIGLFGNTLVIYVVMRFSKMQTVTNIYILNLAIADECFLI-GIPFLLYTMQVGNWPFGN 214
            ||:||.::.:|||.|:|.|::...:|:||||.::|:||::|....| .|||.|....:.::.||.
Zfish    62 LYSLVFLLSVFGNLLIIVVLIVNKRMRTVTNSFLLSLAVSDLMMAIFCIPFNLIPSLLEDFIFGA 126

  Fly   215 YMCK--AYM--VSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRTPFVSKLVSAFAWMTSVLL 275
            .|||  ||.  :|.||::|:    |:.::.:||.|:|:|:.|..::|...:..|.|..|:.||.:
Zfish   127 AMCKTVAYFMGISVSISTFS----LVAIAIERYSAICNPLKSRAWQTRSHAYKVIAATWVLSVAI 187

  Fly   276 MLPVILFASTVQ-SSNGNVS---CNIEWPDTQNSHTDSTFILYSLVLGFATPLTFILVFYCLVIR 336
            |:|..:|:..|. :...|::   |.:|||.:|   .:.|:.:..|.:.|..|...:::.|.|:.|
Zfish   188 MVPYPVFSILVPFNKTNNITAHMCRLEWPISQ---VEQTWYVLLLSILFFIPGVVMIIAYGLISR 249

  Fly   337 KLH---------------------------------------------------TVGP------- 343
            :|:                                                   |.||       
Zfish   250 ELYRGIQFELEQKKDTSGVKNGLNGGLSSCHDESDGCYIQVSKKPPAMELSTLTTSGPVKTDRPR 314

  Fly   344 KHKSKEKKRSHRKVTKLVLTVISAYIFCWLP-----HW-----ISQVALISSAPQRCASRLELAV 398
            .:.|:.|..:.::|.::::.:::.:..||:|     .|     ||....:|.||   .|.::|  
Zfish   315 SNTSEAKLIAKKRVIRMLIIIVAMFFVCWMPLYSANTWKAFDQISAQRALSGAP---ISFIQL-- 374

  Fly   399 FLACGCLSYSNSAMNPILYAFLSDNFKKSFMKACTCAARKDVNAQLQLE 447
                  |||:::.:|||:|.|::..|:|:.:....|..|...|.:.:.|
Zfish   375 ------LSYTSACVNPIIYCFMNTRFRKALLATFGCCRRPCHNRRKRKE 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 94/358 (26%)
TM helix 1 147..173 CDD:320222 11/25 (44%)
TM helix 2 180..206 CDD:320222 11/26 (42%)
TM helix 3 217..247 CDD:320222 12/33 (36%)
TM helix 4 259..281 CDD:320222 7/21 (33%)
TM helix 5 308..337 CDD:320222 6/28 (21%)
TM helix 6 352..382 CDD:320222 7/39 (18%)
TM helix 7 396..421 CDD:320222 9/24 (38%)
cckbraNP_001108186.2 7tmA_CCK-BR 57..398 CDD:320645 94/381 (25%)
TM helix 1 58..84 CDD:320645 11/25 (44%)
TM helix 2 91..117 CDD:320645 11/25 (44%)
TM helix 3 129..159 CDD:320645 12/33 (36%)
TM helix 4 172..193 CDD:320645 7/20 (35%)
TM helix 5 221..250 CDD:320645 6/28 (21%)
TM helix 6 323..353 CDD:320645 4/29 (14%)
TM helix 7 366..391 CDD:320645 12/35 (34%)

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