DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and cmklr2

DIOPT Version :9

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_001343514.2 Gene:cmklr2 / 100004124 ZFINID:ZDB-GENE-091204-457 Length:356 Species:Danio rerio


Alignment Length:321 Identity:89/321 - (27%)
Similarity:153/321 - (47%) Gaps:21/321 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 QNGSHYLE---YDDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNI 182
            :|.:.|.:   |..|.....|:......:|::|:|:|...:|:.||..||:|. .|...:::.::
Zfish    10 ENDTVYFDETGYVVDSRSGGYTQREAFHIISVIIYSLAFTLGIIGNGTVIWVT-GFKIKRSINSV 73

  Fly   183 YILNLAIADECFLIGIPFLL-YTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAV 246
            ::.||||||..|::.:||.: |.::..:|.||..|||......::..:.|.:||.::|.|||::.
Zfish    74 WLQNLAIADFVFVLFLPFSIDYVLRDFHWLFGKTMCKLNSFVCTMNMYASMLFLTVLSLDRYVSF 138

  Fly   247 CHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPDTQNSHTDST- 310
            .|...|.:||....|..:.|..|:.|.:...|.::|...: ..||.:.|...:.| ::.|.... 
Zfish   139 VHFSWSQKYRNVRRSWWLCALIWIISCIFSCPALVFRDVI-LYNGKIVCFNHFHD-EDRHVMKMR 201

  Fly   311 ---FILYSLVLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCW 372
               .:.:..::||..|...|.|...|:..|:      .:|...:.|  ..:::|..||.|:..||
Zfish   202 HIGIVSFRTIVGFILPFATITVSGVLLALKM------RQSNSVRLS--SFSRMVSAVILAFFVCW 258

  Fly   373 LP-HWISQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKAC 432
            .| |..|.:.|.........|.|.:...||.. |::.||.:|||||..|:...:|....||
Zfish   259 APFHTFSIMELSVHHSTALNSVLTIGFPLATS-LAFFNSCVNPILYVLLTKKVRKLVKSAC 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tm_4 156..>372 CDD:304433 58/220 (26%)
7tm_1 162..417 CDD:278431 73/260 (28%)
cmklr2XP_001343514.2 7tm_1 54..303 CDD:278431 73/260 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X22
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.100

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