DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstC-R2 and cmklr2

DIOPT Version :10

Sequence 1:NP_001303398.1 Gene:AstC-R2 / 40019 FlyBaseID:FBgn0036789 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_001343514.2 Gene:cmklr2 / 100004124 ZFINID:ZDB-GENE-091204-457 Length:356 Species:Danio rerio


Alignment Length:321 Identity:89/321 - (27%)
Similarity:153/321 - (47%) Gaps:21/321 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 QNGSHYLE---YDDDGPDCSYSYNFILKLITMILYALVCIIGLFGNTLVIYVVMRFSKMQTVTNI 182
            :|.:.|.:   |..|.....|:......:|::|:|:|...:|:.||..||:|. .|...:::.::
Zfish    10 ENDTVYFDETGYVVDSRSGGYTQREAFHIISVIIYSLAFTLGIIGNGTVIWVT-GFKIKRSINSV 73

  Fly   183 YILNLAIADECFLIGIPFLL-YTMQVGNWPFGNYMCKAYMVSTSITSFTSSIFLLIMSADRYIAV 246
            ::.||||||..|::.:||.: |.::..:|.||..|||......::..:.|.:||.::|.|||::.
Zfish    74 WLQNLAIADFVFVLFLPFSIDYVLRDFHWLFGKTMCKLNSFVCTMNMYASMLFLTVLSLDRYVSF 138

  Fly   247 CHPISSPRYRTPFVSKLVSAFAWMTSVLLMLPVILFASTVQSSNGNVSCNIEWPDTQNSHTDST- 310
            .|...|.:||....|..:.|..|:.|.:...|.::|...: ..||.:.|...:.| ::.|.... 
Zfish   139 VHFSWSQKYRNVRRSWWLCALIWIISCIFSCPALVFRDVI-LYNGKIVCFNHFHD-EDRHVMKMR 201

  Fly   311 ---FILYSLVLGFATPLTFILVFYCLVIRKLHTVGPKHKSKEKKRSHRKVTKLVLTVISAYIFCW 372
               .:.:..::||..|...|.|...|:..|:      .:|...:.|  ..:::|..||.|:..||
Zfish   202 HIGIVSFRTIVGFILPFATITVSGVLLALKM------RQSNSVRLS--SFSRMVSAVILAFFVCW 258

  Fly   373 LP-HWISQVALISSAPQRCASRLELAVFLACGCLSYSNSAMNPILYAFLSDNFKKSFMKAC 432
            .| |..|.:.|.........|.|.:...||.. |::.||.:|||||..|:...:|....||
Zfish   259 APFHTFSIMELSVHHSTALNSVLTIGFPLATS-LAFFNSCVNPILYVLLTKKVRKLVKSAC 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstC-R2NP_001303398.1 7tmA_AstC_insect 146..428 CDD:320222 82/287 (29%)
TM helix 1 147..173 CDD:320222 10/25 (40%)
TM helix 2 180..206 CDD:320222 10/26 (38%)
TM helix 3 217..247 CDD:320222 9/29 (31%)
TM helix 4 259..281 CDD:320222 5/21 (24%)
TM helix 5 308..337 CDD:320222 6/32 (19%)
TM helix 6 352..382 CDD:320222 10/30 (33%)
TM helix 7 396..421 CDD:320222 10/24 (42%)
cmklr2XP_001343514.2 7tm_GPCRs 38..314 CDD:475119 82/287 (29%)
TM helix 1 40..64 CDD:410628 9/24 (38%)
TM helix 2 72..93 CDD:410628 9/20 (45%)
TM helix 3 110..132 CDD:410628 4/21 (19%)
TM helix 4 155..171 CDD:410628 3/15 (20%)
TM helix 5 203..226 CDD:410628 5/22 (23%)
TM helix 6 244..266 CDD:410628 8/21 (38%)
TM helix 7 282..307 CDD:410628 10/25 (40%)

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