DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment rpr and Rin1

DIOPT Version :9

Sequence 1:NP_524138.1 Gene:rpr / 40015 FlyBaseID:FBgn0011706 Length:65 Species:Drosophila melanogaster
Sequence 2:XP_006531773.1 Gene:Rin1 / 225870 MGIID:2385695 Length:798 Species:Mus musculus


Alignment Length:50 Identity:13/50 - (26%)
Similarity:22/50 - (44%) Gaps:12/50 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EAEQKEQQILRL-------RESQWRFLATVVLETLRQYTSCHPKTGRKSG 58
            |.||..|::|:|       .:.:|...|..:|     ||:...:.|..:|
Mouse   515 ETEQVRQKLLQLLRAYSPSAQVKWLLQACKLL-----YTALKSQAGENAG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rprNP_524138.1 None
Rin1XP_006531773.1 SH2_RIN1 81..177 CDD:198256
VPS9 513..631 CDD:128469 12/49 (24%)
Ubiquitin_like_fold 649..729 CDD:391949
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.704428 Normalized mean entropy S1135
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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