DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7320 and Lsp2

DIOPT Version :10

Sequence 1:NP_649034.3 Gene:CG7320 / 40010 FlyBaseID:FBgn0036782 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_524816.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster


Alignment Length:739 Identity:170/739 - (23%)
Similarity:299/739 - (40%) Gaps:175/739 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSLLGLNIHLEVLANGIANRYFLEKQRFLLEILHHVNEP-----------LMNEQWRLLGKQLVT 60
            |:.||...||:   :.:|::.||.||:|:.:||.|:.:.           :..:.|     :.|.
  Fly    15 LATLGQAKHLD---SKVADKDFLMKQKFMYQILQHIYQDDVFTTPFGGSYVEYKPW-----EHVA 71

  Fly    61 DKEQYVVYNEQMTRFYEDFSLGKLLHR----NVRYNPLYADHYRQMLGLYQFFYNARDWYTLWQN 121
            |    .|:.|.:..|:|.:.     |:    ::.::.:|..|...::||.:.||.|::|.|....
  Fly    72 D----YVHPEMLEHFFELWQ-----HQPFTDDMVWSVMYDKHEEYVVGLVRLFYFAKNWETFQHV 127

  Fly   122 ISWARVHVHPCIFVQALTQLILKREDYQALIMPKIYELWPESYHDDVTVRKARNFNFANWIRYVN 186
            :.|||.||:..:||.|:|...|.|:|.|.:::|..||:.|.||.|...:..|.::....:.....
  Fly   128 VYWARQHVNKQLFVYAVTIASLFRDDMQGVVLPAHYEIHPWSYFDSQALEWAEHYKMHGFHHVKQ 192

  Fly   187 MTDVEEIHPQKLEPLNLEGNLRGTIEWFQAMADVNILRMNEQKKRNKLEHLLEDIDWQSYWYNLN 251
            |.::..:    :...|. .|:.|::.:                 .:.|.:.|||:.:.:::|..|
  Fly   193 MDNIYNV----VIRTNY-SNVHGSLNY-----------------DHDLAYYLEDVGFNAFYYYFN 235

  Fly   252 MGVILTAE-------NSDQLREWCYYQLSQILARYKLE--------------------------- 282
            :......:       |.|:..|...|...|:|||:.||                           
  Fly   236 LDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEVPAFNMYVPTESGYASNLR 300

  Fly   283 -CYG-----------------------QKMAYKRLTQNRGINEEFQFITKKISELEAKVGDTISF 323
             .||                       .:|..:|:......||:|...|..:      :|:.|..
  Fly   301 TYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMDWIHKNEKFDVETINV------LGNIIQG 359

  Fly   324 QSIQLTN---GS-----RINLNENNNWLIGLEELFPYDWTQLAVDEVIETNILLDIRTIVRSEDF 380
            .:..:..   ||     |..:||.:::..| :|.||              .:.:...|.:|...|
  Fly   360 NADSVDKKFYGSLDKLYRFIVNEGHHYGHG-DESFP--------------GLFMHYDTSMRDPIF 409

  Fly   381 YYYAERLLDSYRWYRQVFQPNNQKTFIPSDLRIDDMQI-TPLITYDQPVDVDISNIL-------- 436
            |...:.::..|....:.:...::|.:....:.||.:.: ..|.||.:..|.||||.:        
  Fly   410 YEVYKTIVSHYWHLMETYPEYHKKDYAFEGVHIDAVHMPESLTTYFEHFDSDISNAVNVEPAVEG 474

  Fly   437 AAQHFYLAGQFVW----PFTLQHRQFRLQHKDFSYNLLISSNKTQSTIFRVFL--TTSERGGNIQ 495
            :|...|..|:...    .:.::.||.||.||.|.:.|.::|:|.|..:.:||:  ...|.|..|.
  Fly   475 SADPLYTFGRNSHYKGSSYVIKARQQRLNHKPFEFTLDVTSDKAQDAVVKVFIGPKYDEHGHEIP 539

  Fly   496 RE----PFYQLDSFLTVIYPGLNRITRESKEFKGLAGDHISYTELYQFVKLAERDEFDFPLNIST 556
            .|    .|::|:.|...:..|:|.|.|.|.:|.....|..:|.||||.:..|...::.|.|:.|.
  Fly   540 LEHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRTTYLELYQKLMDATNSDYKFKLDQSE 604

  Fly   557 ANCAFPRRLILPRGGLGNPLKLRLLIVASVYDFRARQ----ENELNCDFSQGVSRWDELPLGYPF 617
            |:|..|.|::||||..|..:.....:|...:.....|    :..::|....|....|.||.|:||
  Fly   605 AHCGVPNRMMLPRGKKGGQVFQFFYMVYPYHQPEVAQFTGYDPVVSCGVGHGSRYVDALPFGFPF 669

  Fly   618 ERFLEDDALAVEISGDHVFWKDVH 641
            .|.::           |.::.|||
  Fly   670 NRPVK-----------HDYYFDVH 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7320NP_649034.3 Hemocyanin_N 28..149 CDD:461025 37/135 (27%)
Hemocyanin_M 156..>282 CDD:459787 25/132 (19%)
Hemocyanin_C 400..642 CDD:461026 74/265 (28%)
Lsp2NP_524816.1 Hemocyanin_N 33..156 CDD:461025 37/136 (27%)
Hemocyanin_M 161..420 CDD:459787 50/301 (17%)
Hemocyanin_C 429..692 CDD:461026 74/265 (28%)

Return to query results.
Submit another query.