| Sequence 1: | NP_005564.1 | Gene: | LMNB1 / 4001 | HGNCID: | 6637 | Length: | 586 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001245892.1 | Gene: | Lam / 33782 | FlyBaseID: | FBgn0002525 | Length: | 622 | Species: | Drosophila melanogaster |
| Alignment Length: | 606 | Identity: | 222/606 - (36%) |
|---|---|---|---|
| Similarity: | 357/606 - (58%) | Gaps: | 23/606 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Human 3 TATPVPPRMGSRAGGPTT-------PLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSAL 60
Human 61 QLQVTEREEVRGRELTGLKALYETELADARRALDDTARERAKLQIELGKCKAEHDQLLLNYAKKE 125
Human 126 SDLNGAQIKLREYEAALNSKDAALATALGDKKSLEGDLEDLKDQIAQLEASLAAAKKQLADETLL 190
Human 191 KVDLENRCQSLTEDLEFRKSMYEEEINETRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDA 255
Human 256 QVRLYKEELEQTYHAKLENARLSSEMNTSTVNSAREELMESRMRIESLSSQLSNLQKESRACLER 320
Human 321 IQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEE 385
Human 386 ERLKLSPSPSSRVTVS---------RASSSRSVRTTRGKRKRVDVEESEASSSVSISHSASATGN 441
Human 442 VCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGD--TSVSYKYTSRYVLKAGQTVTIWAANAG 504
Human 505 VTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQ----RSTVFKTTIPEEEEEEEEAAGVVV 565
Human 566 EEELFHQQGTPRASNRSCAIM 586 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LMNB1 | NP_005564.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..31 | 16/34 (47%) | |
| Head | 2..34 | 17/37 (46%) | |||
| Filament | 31..387 | CDD:278467 | 131/355 (37%) | ||
| Coil 1A | 35..69 | 21/33 (64%) | |||
| Linker 1 | 70..81 | 4/10 (40%) | |||
| Coil 1B | 82..215 | 46/132 (35%) | |||
| Linker 2 | 216..243 | 11/26 (42%) | |||
| Coil 2 | 244..386 | 44/141 (31%) | |||
| Tail | 387..586 | 73/213 (34%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 388..432 | 16/52 (31%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 415..420 | 4/4 (100%) | |||
| LTD | 439..543 | CDD:279300 | 38/109 (35%) | ||
| Lam | NP_001245892.1 | Filament | 54..409 | CDD:278467 | 131/354 (37%) |
| Ax_dynein_light | <283..377 | CDD:287215 | 20/93 (22%) | ||
| LTD | 466..572 | CDD:279300 | 40/106 (38%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 270 | 1.000 | Domainoid score | I1835 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0977 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 398 | 1.000 | Inparanoid score | I1952 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG48052 | |
| OrthoDB | 1 | 1.010 | - | - | D204815at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001052 | |
| OrthoInspector | 1 | 1.000 | - | - | mtm8670 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103212 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR45721 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X632 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 13 | 12.840 | |||||