| Sequence 1: | NP_005564.1 | Gene: | LMNB1 / 4001 | HGNCID: | 6637 | Length: | 586 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_694504.2 | Gene: | lmnb1 / 195816 | ZFINID: | ZDB-GENE-020424-2 | Length: | 588 | Species: | Danio rerio |
| Alignment Length: | 586 | Identity: | 409/586 - (69%) |
|---|---|---|---|
| Similarity: | 499/586 - (85%) | Gaps: | 2/586 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 2 ATATPVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTE 66
Human 67 REEVRGRELTGLKALYETELADARRALDDTARERAKLQIELGKCKAEHDQLLLNYAKKESDLNGA 131
Human 132 QIKLREYEAALNSKDAALATALGDKKSLEGDLEDLKDQIAQLEASLAAAKKQLADETLLKVDLEN 196
Human 197 RCQSLTEDLEFRKSMYEEEINETRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDAQVRLYK 261
Human 262 EELEQTYHAKLENARLSSEMNTSTVNSAREELMESRMRIESLSSQLSNLQKESRACLERIQELED 326
Human 327 LLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERLKLS 391
Human 392 PSPSSRVTVSRASSSRSVRTTRGKRKRVDVEESEASSSVSISHSASATGNVCIEEIDVDGKFIRL 456
Human 457 KNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTASPPTDLIWKNQNSW 521
Human 522 GTGEDVKVILKNSQGEEVAQRSTVFKTTI-PEEEEEEEEAAGVVVEEELFHQQGTPRASNRSCAI 585
Human 586 M 586 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LMNB1 | NP_005564.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..31 | 14/28 (50%) | |
| Head | 2..34 | 17/31 (55%) | |||
| Filament | 31..387 | CDD:278467 | 250/355 (70%) | ||
| Coil 1A | 35..69 | 24/33 (73%) | |||
| Linker 1 | 70..81 | 8/10 (80%) | |||
| Coil 1B | 82..215 | 85/132 (64%) | |||
| Linker 2 | 216..243 | 21/26 (81%) | |||
| Coil 2 | 244..386 | 101/141 (72%) | |||
| Tail | 387..586 | 141/199 (71%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 388..432 | 43/43 (100%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 415..420 | 4/4 (100%) | |||
| LTD | 439..543 | CDD:279300 | 66/103 (64%) | ||
| lmnb1 | NP_694504.2 | Filament | 32..388 | CDD:278467 | 250/355 (70%) |
| LTD | 436..544 | CDD:279300 | 70/107 (65%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C194341356 | |
| Domainoid | 1 | 1.000 | 486 | 1.000 | Domainoid score | I2963 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H55912 | |
| Inparanoid | 1 | 1.050 | 792 | 1.000 | Inparanoid score | I3536 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG48052 | |
| OrthoDB | 1 | 1.010 | - | - | D178000at7742 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001052 | |
| OrthoInspector | 1 | 1.000 | - | - | oto44758 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103212 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR45721 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R8297 |
| SonicParanoid | 1 | 1.000 | - | - | X632 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 1 | 1.500 | - | - | ||
| 17 | 17.440 | |||||