| Sequence 1: | NP_005564.1 | Gene: | LMNB1 / 4001 | HGNCID: | 6637 | Length: | 586 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_034851.2 | Gene: | Lmnb1 / 16906 | MGIID: | 96795 | Length: | 588 | Species: | Mus musculus |
| Alignment Length: | 588 | Identity: | 564/588 - (95%) |
|---|---|---|---|
| Similarity: | 574/588 - (97%) | Gaps: | 2/588 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MATATPV-PPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQV 64
Human 65 TEREEVRGRELTGLKALYETELADARRALDDTARERAKLQIELGKCKAEHDQLLLNYAKKESDLN 129
Human 130 GAQIKLREYEAALNSKDAALATALGDKKSLEGDLEDLKDQIAQLEASLAAAKKQLADETLLKVDL 194
Human 195 ENRCQSLTEDLEFRKSMYEEEINETRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDAQVRL 259
Human 260 YKEELEQTYHAKLENARLSSEMNTSTVNSAREELMESRMRIESLSSQLSNLQKESRACLERIQEL 324
Human 325 EDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERLK 389
Human 390 LSPSPSSRVTVSRASSSRSVRTTRGKRKRVDVEESEASSSVSISHSASATGNVCIEEIDVDGKFI 454
Human 455 RLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTASPPTDLIWKNQN 519
Human 520 SWGTGEDVKVILKNSQGEEVAQRSTVFKTTIP-EEEEEEEEAAGVVVEEELFHQQGTPRASNRSC 583
Human 584 AIM 586 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LMNB1 | NP_005564.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..31 | 23/30 (77%) | |
| Head | 2..34 | 25/32 (78%) | |||
| Filament | 31..387 | CDD:278467 | 346/355 (97%) | ||
| Coil 1A | 35..69 | 33/33 (100%) | |||
| Linker 1 | 70..81 | 10/10 (100%) | |||
| Coil 1B | 82..215 | 128/132 (97%) | |||
| Linker 2 | 216..243 | 26/26 (100%) | |||
| Coil 2 | 244..386 | 136/141 (96%) | |||
| Tail | 387..586 | 191/199 (96%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 388..432 | 43/43 (100%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 415..420 | 4/4 (100%) | |||
| LTD | 439..543 | CDD:279300 | 102/103 (99%) | ||
| Lmnb1 | NP_034851.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..34 | 25/32 (78%) | |
| Head | 2..35 | 25/32 (78%) | |||
| Filament | 32..388 | CDD:278467 | 346/355 (97%) | ||
| Coil 1A | 36..70 | 33/33 (100%) | |||
| Linker 1 | 71..82 | 10/10 (100%) | |||
| Coil 1B | 83..216 | 128/132 (97%) | |||
| Linker 2 | 217..244 | 26/26 (100%) | |||
| Coil 2 | 245..387 | 136/141 (96%) | |||
| Tail | 388..588 | 191/199 (96%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 391..433 | 41/41 (100%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 416..421 | 4/4 (100%) | |||
| LTD | 440..544 | CDD:279300 | 102/103 (99%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83970302 | |
| Domainoid | 1 | 1.000 | 664 | 1.000 | Domainoid score | I4224 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0977 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H55912 | |
| Inparanoid | 1 | 1.050 | 1074 | 1.000 | Inparanoid score | I5219 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG48052 | |
| OrthoDB | 1 | 1.010 | - | - | D125047at32523 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001052 | |
| OrthoInspector | 1 | 1.000 | - | - | oto121291 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103212 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR45721 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R8297 |
| SonicParanoid | 1 | 1.000 | - | - | X632 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 19 | 19.300 | |||||