DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp312a1 and cyp1c1

DIOPT Version :9

Sequence 1:NP_001262008.1 Gene:Cyp312a1 / 40005 FlyBaseID:FBgn0036778 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001018446.2 Gene:cyp1c1 / 553637 ZFINID:ZDB-GENE-050522-501 Length:523 Species:Danio rerio


Alignment Length:540 Identity:114/540 - (21%)
Similarity:209/540 - (38%) Gaps:79/540 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WLGFGLLLLALSLYLLYVFERQSRIDRLTHK--WPAPPALPFIGHLHILAKLVGPHPLRRATEMI 65
            |.|.....|..|..:|:..|....:..||.|  .|.|.|.|.:|:    |..:|..|....:::.
Zfish    16 WSGQVQPALIASFIILFFLEACLWVRNLTFKKRLPGPFAWPLVGN----AMQLGQMPHITFSKLA 76

  Fly    66 NEHLHDHRAKLWMGTKLYLVDCNPKDIQAL----CSAQQLLQKTNDYRVFENWLC--------EG 118
            .::.:.::.:|         .|:  ||..|    ...:.|:|.:.::....|::.        ..
Zfish    77 KKYGNVYQIRL---------GCS--DIVVLNGDAAIRKALVQHSTEFAGRPNFVSFQMISGGRSS 130

  Fly   119 LFTSGFEKWSHRRKI---VMPAFNYTMIKQFVAVFEK----QSRILLTNVAKFAESGDQIDFLQL 176
            .||:..::|...||:   .:.||:... .|....||:    ::..|:....:.:..|...:....
Zfish   131 TFTNYSKQWKTHRKVAQSTLRAFSMAN-SQTRKTFEQHVVGEAMDLVQKFLRLSADGRHFNPAHE 194

  Fly   177 ISCFTLDTICETALGVSVGSQSSAKSEYLDAVK---------SILVIIDKRLKNIFYRNSFIFKR 232
            .:....:.:|....|...|.........|..|.         |::.::.       :..||....
Zfish   195 ATVAAANVVCALCFGKRYGHDDPEFRTLLGRVNKFGETVGAGSLVDVMP-------WLQSFPNPV 252

  Fly   233 TSHYKREQELIKTLHGFTEGIIQKRIDEINQDAENRNYQSSDAELDGVKRTLCFLDTLLLSKGPD 297
            .|.|:..:.:.|....:.:..:.:..|..:.|...   ..|||.:..::.               
Zfish   253 RSVYQNFKTINKEFFNYVKDKVLQHRDTYDPDVTR---DMSDAIIGVIEH--------------- 299

  Fly   298 GKPLTV-KDIREEVDTIIFG-GFDLTATTLNFFMYNMTLHPEHQQRCREEVWSVCGKDKSEPISI 360
            ||..|: ||..|...|.:.| |.|..:|.:.:.:..:..:|..|.:.:|::..|.|:|:..  ||
Zfish   300 GKESTLTKDFVESTVTDLIGAGQDTVSTAMQWMLLLLVKYPSIQSKLQEQIDKVVGRDRLP--SI 362

  Fly   361 EQVRQLEFLEACIKETLRMYPSGPLT-ARKATANCTINDFFIPKGSDVIISPIYMGRCKDFFPDP 424
            |....|.:|:|.|.||:|.....|:| ....|::.||....|||.:.|.|:...:......:.||
Zfish   363 EDRCNLAYLDAFIYETMRFTSFVPVTIPHSTTSDVTIEGLHIPKDTVVFINQWSVNHDPQKWSDP 427

  Fly   425 MVFKPDRW--AIGAEPKIEATTFIPFMAGARSCMGQRYAMVMLKMVLAHLLRNFLFEPLGERQVK 487
            .:|.|.|:  ..||..|....:.:.|..|.|.|:|::.|.|.:.:..|.||....||....:.:.
Zfish   428 HIFNPSRFLDENGALNKDLTNSVMIFSTGKRRCIGEQIAKVEVFLFSAILLHQCKFERDPSQDLS 492

  Fly   488 LKLNFVITLHTVEPYLCRAK 507
            :..::.:.|..:. |...||
Zfish   493 MDCSYGLALKPLH-YTISAK 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp312a1NP_001262008.1 p450 35..505 CDD:278495 103/502 (21%)
cyp1c1NP_001018446.2 p450 50..504 CDD:278495 102/496 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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