DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp312a1 and Cyp4f17

DIOPT Version :9

Sequence 1:NP_001262008.1 Gene:Cyp312a1 / 40005 FlyBaseID:FBgn0036778 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001178915.1 Gene:Cyp4f17 / 500801 RGDID:1561655 Length:524 Species:Rattus norvegicus


Alignment Length:528 Identity:162/528 - (30%)
Similarity:264/528 - (50%) Gaps:46/528 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WLGFG---------LLLLALSLYLLYV-------FERQSRIDRLTHKWPAPPALP-FIGHLHILA 50
            |||.|         ||::..||.|..:       ::...|:    ..:|.||:.. |.|||:::.
  Rat     8 WLGRGPVTVSPWQLLLVVGTSLLLARILAWISAFYDNYCRL----RCFPQPPSRHWFWGHLNLVK 68

  Fly    51 KLVGPHPLRRATEMINEHLHDHRAKLWMG---TKLYLVDCNPKDIQALCSAQQLL--QKTNDYRV 110
            .  ....|:...||.::....|..  |:|   ..|.|:  :||.|..:..|...:  ::...|..
  Rat    69 N--NEEGLQLLAEMSHQFQDIHLC--WIGIFYPILRLI--HPKFIGPILQAPAAVAPKEMIFYGF 127

  Fly   111 FENWLCEGLFTSGFEKWSHRRKIVMPAFNYTMIKQFVAVFEKQSRILLTNVAKFAESGD-QIDFL 174
            .:.||.:||..|..||||.:|:::.|||::.::|.:|..|.|...|:.....:....|. ::|..
  Rat   128 LKPWLGDGLLVSAGEKWSRQRRLLTPAFHFDILKPYVKNFNKSVNIMHAKWQRLTAKGSARLDMF 192

  Fly   175 QLISCFTLDTICETALGVSVGSQSSAKSEYLDAVKSILVIIDKRLKNIFYRNSFIFKRTSHYKRE 239
            :.||..|||::.:.........|.| .|||:.|::.:..:|.||....|....|::..|:..:|.
  Rat   193 EHISLMTLDSLQKCVFSFDSNCQES-PSEYIAAIQELSSLIVKRHHQPFLYMDFLYYLTADGRRF 256

  Fly   240 QELIKTLHGFTEGIIQKRIDEINQDAENRNYQSSDAELDGVKRTLCFLDTLLLSKGPDGKPLTVK 304
            ::....:|.||:.:|::|...::..:.:...:|...     .:||.|:|.|||:|...||.|:.:
  Rat   257 RKACDLVHNFTDAVIRERRRTLSSQSVDEFLKSKTK-----SKTLDFIDVLLLAKDEHGKELSDE 316

  Fly   305 DIREEVDTIIFGGFDLTATTLNFFMYNMTLHPEHQQRCREEVWSVCGKDKSEPISIEQVRQLEFL 369
            |||.|.||.:|||.|.||:.|::.:||:..|||||:|||:||..:....:.|.|..:.:.||.||
  Rat   317 DIRAEADTFMFGGHDTTASALSWILYNLARHPEHQERCRQEVRELLRDREPEEIEWDDLTQLPFL 381

  Fly   370 EACIKETLRMYPSGPLTARKATANCTIND-FFIPKGSDVIISPIYMGRCKDFFPDPMVFKPDRWA 433
            ..||||:||::|...:.:|..|.:..:.| ..||||:|.|||...:......:|||.|:.|.|:.
  Rat   382 TMCIKESLRLHPPVTVISRCCTQDVVLPDGRVIPKGNDCIISIFGVHHNPSVWPDPEVYDPFRFD 446

  Fly   434 IGAEPKIEATTFIPFMAGARSCMGQRYAMVMLKMVLAHLLRNFLFEPLGERQVKLKLNFVITLH- 497
            .....|.....||||.||.|:|:||.:||..:|:.:|..|..|...| .:::.:.|...::... 
  Rat   447 SENPQKRSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRLLP-DDKEPRRKPELILRAEG 510

  Fly   498 ----TVEP 501
                .|||
  Rat   511 GLWLRVEP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp312a1NP_001262008.1 p450 35..505 CDD:278495 152/480 (32%)
Cyp4f17NP_001178915.1 p450 52..514 CDD:278495 149/474 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348585
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

Return to query results.
Submit another query.