DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp312a1 and cyp-13A10

DIOPT Version :9

Sequence 1:NP_001262008.1 Gene:Cyp312a1 / 40005 FlyBaseID:FBgn0036778 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_496085.3 Gene:cyp-13A10 / 174522 WormBaseID:WBGene00014254 Length:519 Species:Caenorhabditis elegans


Alignment Length:561 Identity:132/561 - (23%)
Similarity:226/561 - (40%) Gaps:145/561 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WLGFGLLLLALSLYL-LYVFERQSRIDRLTHKWPAPPALPFIG------------HLHI--LAKL 52
            ::||      :|.|| ::.:.|:..|       |.|...|.:|            :|.|  ..||
 Worm    12 FIGF------ISYYLWIWTYWRRRGI-------PGPLGYPLVGSFPKTLKSEYPQYLQIRDWTKL 63

  Fly    53 VGPHPLRRATE---------------MINEHLHDHRAKLWMGTKLYLVDCNP-KDIQALCSAQQL 101
            .|  |:...||               .|....:|:    :.|.||..:..:| ||          
 Worm    64 YG--PIYGYTEGTIKTLIVSDIDIVRQIFVEQYDN----FYGRKLNPIQGDPEKD---------- 112

  Fly   102 LQKTNDYRVFENWLCEGLFTSGFEKWSHRRKIVMPAFNYTMIKQFVAVFEKQSRILLTNVAKFAE 166
             ::||            ||::...:|...|.|..|.|:...:::.....|..:..||.::.:...
 Worm   113 -ERTN------------LFSAQGFRWKRLRAISSPTFSNNSLRKINVTVEDSAMELLRHIEEQTS 164

  Fly   167 SGDQIDFLQLISCFTLDTICETALGVSVGSQSSAKSEYLDAVKSILVIIDKRLKNI--------- 222
            .|.|||.||....||:|||...|:|     |:.::......:|.:..|.....|:|         
 Worm   165 EGQQIDMLQFYQEFTMDTIGRIAMG-----QTDSQMFKNPLLKFVRAIFGDNRKHIPLIGGVFPT 224

  Fly   223 ------FYRNSFIFKRTSHYKREQELIKTLHGFTEGIIQKRIDEINQDAENRNYQSSDAELDGVK 281
                  |:...|.....:::....:.:.|       .:|.|||:...|.:|           |::
 Worm   225 LAQVFRFFMLKFPLLGAANFIHVNKTVVT-------AVQNRIDQRENDRKN-----------GIE 271

  Fly   282 --RTLCFLDTLLLSKGPD------------------GKPLTVKDIREEVDTIIFGGFDLTATTLN 326
              ....|:|..|.::..|                  .:.||.::|..:....:..|||.||.:|:
 Worm   272 IGEPQDFIDLFLEARADDVEHFQENNGDFSKTSSYGNRQLTTQEIVGQCLVFLIAGFDTTALSLS 336

  Fly   327 FFMYNMTLHPEHQQRCREEVWSVCGKDKSEP-ISIEQVRQLEFLEACIKETLRMYPSGPL-TARK 389
            :..:.:..|||.|::.:||:...|    .|| ||.:.:.:|::::..||||||:||.|.: .:|:
 Worm   337 YTTFLLATHPEVQKKLQEEIEREC----IEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRR 397

  Fly   390 ATANCTINDFFIPKGSDVIISPIYMGR-CKDFFPDPMVFKPDRWAIGAEPKIEAT----TFIPFM 449
            ......:.:..:..|:.|.:....:.. .|.:..|...|||:||   .:|..:..    .:|.|.
 Worm   398 CMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERW---LDPNCDQVFQKGGYISFG 459

  Fly   450 AGARSCMGQRYAMVMLKMVLAHLLRNFLFEPLGERQVKLKL 490
            .|.|.|:|.|.|.:..||:|||:||.:.||...:.::.|||
 Worm   460 LGPRQCVGMRLAYMEEKMLLAHILRKYTFEVGTKTEIPLKL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp312a1NP_001262008.1 p450 35..505 CDD:278495 125/528 (24%)
cyp-13A10NP_496085.3 p450 32..500 CDD:278495 123/526 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D825914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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