Sequence 1: | NP_649028.3 | Gene: | RpIIIC53 / 40002 | FlyBaseID: | FBgn0036775 | Length: | 415 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_010131.1 | Gene: | RPC53 / 851404 | SGDID: | S000002309 | Length: | 422 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 430 | Identity: | 90/430 - (20%) |
---|---|---|---|
Similarity: | 162/430 - (37%) | Gaps: | 92/430 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 GMTRLTPARDLTLGGRGAGTASKKVFAPNLNAVRNKNANVKTSKDTTQPRSGRRGGR----GNGT 101
Fly 102 GATRGRGGNS---AGGGNSTLIQTQGLFSEG-----AGDVHVRR----STGNGTAYARGGEE--- 151
Fly 152 --VSVTRKRVDRKDDKSQAERIKELL-----------------GESDASGG-ELSEEE--ANKTE 194
Fly 195 --MALRPILLKEGLWVTQKTPIAKQEIASSTSTLKDT---------------------------- 229
Fly 230 -LAVAQHLQQLHVAAQAASLEEPPLQYGRYPRTIGNFLDSSEAQIFLMQLPDVLPCVGDDSEDPE 293
Fly 294 PSKGDHQATSESEPASPADKCSNGPKGSV-----LRQLEEGQIGKILRYKSGRVKLQLGDTRFDL 353
Fly 354 DMGLDPGFLQELMSVTANREQRSGNMINLGPIQAKLKATP 393 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIIIC53 | NP_649028.3 | RNA_pol_Rpc4 | 272..395 | CDD:282926 | 31/127 (24%) |
RPC53 | NP_010131.1 | RNA_pol_Rpc4 | 301..420 | CDD:398686 | 29/127 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157346338 | |
Domainoid | 1 | 1.000 | 45 | 1.000 | Domainoid score | I3102 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3122 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 47 | 1.000 | Inparanoid score | I1871 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5286 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003960 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR13408 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1192 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.870 |