Protein Alignment RpIIIC53 and AT4G25180

DIOPT Version :9

• Sequence 1: NP_649028.3
• Gene: RpIIIC53 / 40002
• FlyBaseID: FBgn0036775
• Length: 415
• Species: Drosophila melanogaster
• Sequence 2: NP_194248.2
• Gene: AT4G25180 / 828621
• AraportID: AT4G25180
• Length: 311
• Species: Arabidopsis thaliana
• Alignment Length: 302
• Identity: 62/302 - (20%)
• Similarity: 110/302 - (36%)
• Gaps: 94/302 - (31%)

  Fly   153 SVTRKRVDRKDDKSQAERIKELLGESDASGGELSEEEANKTEMALRPILLKEGLWVTQKTPIAKQ 217
            |.|....|.::.|:..:..:.::|....     :|.:|:..|:|.:|.|          :|:|.:
plant    29 SNTEAEEDEENIKASRQFDRRIVGRRPK-----TETKASSPEVAFQPSL----------SPLAIR 78

  Fly   218 EI------------------ASSTSTLKDTLAVAQHLQQLH--VAAQAASLEEP----------- 251
            ..                  ||....:....|..:..:::|  |........||
plant    79 SFGVPKEDDKPNSDVNPSSPASILPAVSSVTAAQEDGEEVHNFVTRTGDDYVEPWDYRNSYYPTV 143

  Fly   252 -PL--------------QYGRYPR-------TIGN-------FLDSSEAQIFLMQLPDVLPCVGD 287
             ||              ::|...:       ||.:       .:..|:.|:|:.::||.||.|
plant   144 LPLRKPNSGDIELLDQEEFGEVAKNRDYDENTINSAEELGLTSVQHSKKQMFIFKIPDCLPVV-- 206

  Fly   288 DSEDPEPSKGDHQATSESEPASPADKCSNGPKGSVLRQLEEGQIGKILRYKSGRVKLQLGDTRFD 352
                    |....||::......:...||..:|     |.||.:||:|.||||.|||::||..||
plant   207 --------KQTTGATTKRSVREYSSGISNPFEG-----LPEGFMGKMLVYKSGAVKLKVGDALFD 258

  Fly   353 LDMGLDPGFLQELMSVTANREQRSGNMINLGPIQAKLKATPD 394
            :..|.......:::::    :.:..|...:|.....:..|||
plant   259 VSPGPGTKIPNDVVAI----DIKGRNCSRIGSSAKFVTVTPD 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RpIIIC53	NP_649028.3	RNA_pol_Rpc4	272..395	CDD:282926	36/123 (29%)
AT4G25180	NP_194248.2	RNA_pol_Rpc4	232..297	CDD:368299	23/69 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	52	1.000	Domainoid score	I4281
eggNOG	1	0.900	-	-		E1_KOG3122
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003960
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR13408
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.910