Sequence 1: | NP_649028.3 | Gene: | RpIIIC53 / 40002 | FlyBaseID: | FBgn0036775 | Length: | 415 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_588386.1 | Gene: | rpc53 / 2538851 | PomBaseID: | SPCC18.07 | Length: | 330 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 318 | Identity: | 73/318 - (22%) |
---|---|---|---|
Similarity: | 120/318 - (37%) | Gaps: | 78/318 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 120 IQTQGLFSEGAGDVHVRRSTGNGTAYARGGEEVSVTRKRVDRKDDKSQAERIKELLGESDASGG- 183
Fly 184 -----------ELSEEEANKTEMA----LRPIL------------LKEGLWVTQKTPIAKQEIAS 221
Fly 222 STSTLKDTLAVAQHLQQLHVAAQAASLEEPPLQYGRYPRTIGNFLDSSEAQIFLMQLPDVLP-CV 285
Fly 286 GDDSEDPE-PSK--GDHQATSESEPASPADKCSNGPKGSVLRQLEE----------GQIGKILRY 337
Fly 338 KSGRVKLQLGDTRFDLDMGLDPGFLQELMSVTANREQRSGNMINLGPIQAKLKATPDW 395 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIIIC53 | NP_649028.3 | RNA_pol_Rpc4 | 272..395 | CDD:282926 | 39/136 (29%) |
rpc53 | NP_588386.1 | RNA_pol_Rpc4 | 196..330 | CDD:282926 | 40/141 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I3513 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3122 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003960 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR13408 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1192 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.940 |