DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip75B and VDR

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001351014.1 Gene:VDR / 7421 HGNCID:12679 Length:494 Species:Homo sapiens


Alignment Length:513 Identity:146/513 - (28%)
Similarity:229/513 - (44%) Gaps:112/513 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 SSSIPDL-EFD-GTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILR 505
            |:|:||. :|| ....:|.||||:|:|||:...:|||||||||||:::|..: .|..|..|.|.:
Human     7 STSLPDPGDFDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALF-TCPFNGDCRITK 70

  Fly   506 INRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATEL-----DD 565
            .||..||.||||:|:.:||.::.:......:|::..||        .|.::.||...|     ::
Human    71 DNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMIL--------KRKEEEALKDSLRPKLSEE 127

  Fly   566 QPRLLAAVLRAHLET--------CEFTKE-KVS------AMRQRARDCPSYSMPTLLAC------ 609
            |.|::|.:|.||.:|        |:|... :|:      ..|..:|..||:|..:..:|      
Human   128 QQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSHPSRPNSRHTPSFSGDSSSSCSDHCIT 192

  Fly   610 -------------------PLNPAPELQSEQ-----EFSQRFAHVIRGVIDFAGMIPGFQLLTQD 650
                               ..:|:..|:..|     ..:...::.|:.||.||.|||||:.||.:
Human   193 SSDMMDSSSFSNLDLSEEDSDDPSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSE 257

  Fly   651 DKFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVMRR--DAIQNGANARFLVDSTFNFAERMN 713
            |:..|||:...:.:.:|....|.....|..|.|.....|  |..:.|.:.. |::....|...:.
Human   258 DQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLE-LIEPLIKFQVGLK 321

  Fly   714 SMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYSRLKGCLQ-YIVAQNRPDQPEFL-AKLLET 776
            .:||.:.|..|..||.:::|||||:::..|||.:..||...|| ||..::.|.....| ||:::.
Human   322 KLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQK 386

  Fly   777 MPDLRTLSTLHTEKLVVFRTEHKELLRQQMWSME--------DGNNSD--GQQNKSPSGSWADAM 831
            :.|||:|:..|::       :::.|..|...||:        .||...  ||....|  .|.   
Human   387 LADLRSLNEEHSK-------QYRCLSFQPECSMKLTPLVLEVFGNEISXLGQPVAVP--GWG--- 439

  Fly   832 DVEAAKSPLGSVSSTESADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLS 889
                                 ..|.::.|.:|..|.|.|   |..:..|||.|...||
Human   440 ---------------------CSSRATCQARGWRLLSSP---PHPVWGSAPPLPPPLS 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 37/87 (43%)
NR_LBD_REV_ERB 609..796 CDD:132738 59/220 (27%)
VDRNP_001351014.1 NR_DBD_VDR 16..122 CDD:143513 45/114 (39%)
Hinge 97..126 7/36 (19%)
NR_LBD_VDR 124..426 CDD:132731 80/309 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..190 7/31 (23%)
Vitamin D3 binding 227..237 0/9 (0%)
Vitamin D3 binding 271..278 1/6 (17%)
9aaTAD. /evidence=ECO:0000269|PubMed:30468856 416..424 0/7 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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