DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip75B and Eip78C

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001246862.1 Gene:Eip78C / 40345 FlyBaseID:FBgn0004865 Length:862 Species:Drosophila melanogaster


Alignment Length:854 Identity:218/854 - (25%)
Similarity:314/854 - (36%) Gaps:347/854 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 SALHHYQQQQPQRQQSPPPLHHQQQQQQQHVRVIRDGRLYDEATVVVAARRHSVSPPPLHH---- 234
            ::|...|:::.|.|        |.|||:||.|.:.|.....||           .|..|.|    
  Fly   116 NSLESEQEEEKQTQ--------QHQQQKQHHRDLEDCLSAIEA-----------DPLQLLHCDDF 161

  Fly   235 HSRSAPVSPVIARRGGAAAYMDQQYQQRQTPPLAPPPPPPPPPPPPPPPQQQQQQYISTGVPPPT 299
            :..||....|      ||:...||.||||                                    
  Fly   162 YRTSALAESV------AASLSPQQQQQRQ------------------------------------ 184

  Fly   300 AAARKFVVSTSTRHVNVIASNHFQQQQQQHQAQQHQQQHQQHQQHQ-----------QHVIASV- 352
                                 |..|||||   ||.||||...||||           .:.|:|| 
  Fly   185 ---------------------HTHQQQQQ---QQQQQQHPGQQQHQLNCTLSNGGGALYTISSVH 225

  Fly   353 -------------------------------------------SSSSSSSAIG---SGGSSSSHI 371
                                                       |:||||||:.   |.|.||::.
  Fly   226 QFGPASNHNTSSSSPSSSAAHSSPDSGCSSASSSGSSRSCGSSSASSSSSAVSSTISSGRSSNNS 290

  Fly   372 FRTPVVSSSSSSNMHHQQQQQ-------QQQSSLGNSVMRPPPPPPPPKVKHASSSSSGNSSSSN 429
            ...|..:|||.::::.:||||       |||......:..|           ....|.|.:.||:
  Fly   291 VVNPAATSSSVAHLNKEQQQQPLPTTQLQQQQQHQQQLQHP-----------QQQQSFGLADSSS 344

  Fly   430 TNNSSSSSNGEEPSSSIPDLEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRP 494
            :|.||:::||....|.:|          |:||||||||:||||.||||||||||||||::|:|| 
  Fly   345 SNGSSNNNNGVSSKSFVP----------CKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYR- 398

  Fly   495 CTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREK------ARILAA-------- 545
            |.::.:|.::|:|||||||||.|||::.|||||:||:||||||.:      |...||        
  Fly   399 CLRDGKCLVIRLNRNRCQYCRFKKCLSAGMSRDSVRYGRVPKRSRELNGAAASSAAAGAPASLNV 463

  Fly   546 ----------------------MQQSTQNRGQQRALATELDDQPR-------------------- 568
                                  .||..|....|.....:|..||.                    
  Fly   464 DDSTSSTLHPSHLQQQQQQHLLQQQQQQQHQPQLQQHHQLQQQPHVSGVRVKTPSTPQTPQMCSI 528

  Fly   569 ----------------------------------------------------------------- 568
                                                                             
  Fly   529 ASSPSELGGCNSANNNNNNNNNSSSGNASGGSGVSVGVVVVGGHQQLVGGSMVGMAGMGTDAHQV 593

  Fly   569 ------------------LLAAVLRAHLETCEFTKEKVSAMRQRARDCPSYSMPTLLACPLNPAP 615
                              ::..|.:||...|.:|:|....:.:|....|...:.:.:|..|    
  Fly   594 GMCHDGLAGTANELTVYDVIMCVSQAHRLNCSYTEELTRELMRRPVTVPQNGIASTVAESL---- 654

  Fly   616 ELQS---EQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSIN 677
            |.|.   .|:||.|....::.:::||..:|||...||||:..|:|.|.|:.....:..:.:.:  
  Fly   655 EFQKIWLWQQFSARVTPGVQRIVEFAKRVPGFCDFTQDDQLILIKLGFFEVWLTHVARLINEA-- 717

  Fly   678 SIICLNGQVMRRDAIQNGANARFLVDSTF-----NFAERMNSMNLTDAEIGLFCAIVLITPDRPG 737
            ::...:|..:.|..::      .|.||.|     |||..:|:..|:|.|||||.|:||:..||.|
  Fly   718 TLTLDDGAYLTRQQLE------ILYDSDFVNALLNFANTLNAYGLSDTEIGLFSAMVLLASDRAG 776

  Fly   738 LRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKL--LET-MPDLRTLSTLHTEKLVVFRTEHK 799
            |...::|.:....:...|:..:.::|...|:.|..:  ||. :|:||:|...|        ..|.
  Fly   777 LSEPKVIGRARELVAEALRVQILRSRAGSPQALQLMPALEAKIPELRSLGAKH--------FSHL 833

  Fly   800 ELLRQQMWS 808
            :.||.. |:
  Fly   834 DWLRMN-WT 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 58/93 (62%)
NR_LBD_REV_ERB 609..796 CDD:132738 56/197 (28%)
Eip78CNP_001246862.1 NR_DBD_DmE78_like 363..443 CDD:143539 58/80 (73%)
NR_LBD_DmE78_like 659..854 CDD:132739 57/200 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I8190
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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