DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip75B and knrl

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001303368.1 Gene:knrl / 40285 FlyBaseID:FBgn0001323 Length:647 Species:Drosophila melanogaster


Alignment Length:926 Identity:172/926 - (18%)
Similarity:290/926 - (31%) Gaps:337/926 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAV 522
            |:|||:.|:|||:|..:|||||.||.||.........|..|.:|.|.:.||..|:.||||||:.|
  Fly    14 CKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISDCKNNGECIINKKNRTACKACRLKKCLMV 78

  Fly   523 GMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEK 587
            |||:...|:||.....|...|                   |.:|.:...|.:.||..:       
  Fly    79 GMSKSGSRYGRRSNWFKIHCL-------------------LQEQQQQAVAAMAAHHNS------- 117

  Fly   588 VSAMRQRARDCPS------YSMPT----LLACPLNPAPELQSEQEFSQRFAHVIRGVIDFAGMIP 642
                 |:|....|      ..||.    :...| .||.            |....|::...|..|
  Fly   118 -----QQAGGGSSGGSGGGQGMPNGVKGMSGVP-PPAA------------AAAALGMLGHPGGYP 164

  Fly   643 GFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFN 707
            |.        :.:..||                                   |::          
  Fly   165 GL--------YAVANAG-----------------------------------GSS---------- 176

  Fly   708 FAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAK 772
                                           |:.|  |.|...|.|.::|               
  Fly   177 -------------------------------RSKE--ELMMLGLDGSVEY--------------- 193

  Fly   773 LLETMPDLRTLSTLHTEKLVVFRTEHKE-LLRQQMWSMEDGNNSDGQQNKSPSGSWADAMDVEAA 836
                                   ..||. ::.....|..|.:|||            .:::|.:.
  Fly   194 -----------------------GSHKHPVVASPSVSSPDSHNSD------------SSVEVSSV 223

  Fly   837 K-SPL-------GSVSSTESADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGGCP 893
            : :||       .|..|:..||..:.........||:...|||.:.. |:...||         |
  Fly   224 RGNPLLHLGGKSNSGGSSSGADGSHSGGGGGGGGGVTPGRPPQMRKD-LSPFLPL---------P 278

  Fly   894 LRNRANSGSSGDSGAAEMDIVGSHAHLTQNGLTI----TPIVRHQQ------QQQQQQQIGILNN 948
            .           .|.|.|.::...|.|..:.|..    ..:..|.|      .:|||..:.....
  Fly   279 F-----------PGLASMPVMPPPAFLPPSHLLFPGYHPALYSHHQGLLKPTPEQQQAAVAAAAV 332

  Fly   949 AHSRNLNG-------GHAMCQQQQQHPQLHHHLTAGAARYRKLDSPTDSGIESGNEKNECKAVSS 1006
            .|..|.:|       |.:.....|||             :::.|.|..:...|.:..|. ..:::
  Fly   333 QHLFNSSGAGQRFAPGTSPFANHQQH-------------HKEEDQPAPARSPSTHANNN-HLLTN 383

  Fly  1007 GGSSSCSSPRSSVDDALDCSDAAANHNQVVQHPQLSVVSVSPVRSPQPSTS--SHLKRQIVEDMP 1069
            ||::                      :::.:...|..|..|..:||.|:|.  .|.|:.      
  Fly   384 GGAA----------------------DELTKRFYLDAVLKSQQQSPPPTTKLPPHSKQD------ 420

  Fly  1070 VLKRVLQAPPLYDTNSLM-DEAYKPHKKFRALRHREFETAEAD-----ASSSTSGSNSLSAGSPR 1128
                       |..::|: ..:....::.::.::.|.:.|.||     |.......:.:.:.:|.
  Fly   421 -----------YSISALVTPNSESGRERVKSRQNEEDDEARADGIIDGAEHDDEEEDLVVSMTPP 474

  Fly  1129 QSPVPNSVATPPPSAASAAAGNPAQSQLHMHLTRSSPKASMASSHSVLAKSLMAEPRMTPEQMKR 1193
            .||......||.......:.|......|.|..|.||..:..:|            |.:.||....
  Fly   475 HSPAQQEERTPAGEDPRPSPGQDNPIDLSMKTTGSSLSSKSSS------------PEIEPETEIS 527

  Fly  1194 SDIIQNYLKRENSTAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSSVITTTCQQRQQSVSPH 1258
            ||:.:|....::.....:....:..|     .|..|...::.         ::|.:..:.|:...
  Fly   528 SDVEKNDTDDDDEDLKVTPEEEISVR-----ETADPEIEEDH---------SSTTETAKTSIENT 578

  Fly  1259 SNGSSSSSSSSSSSSSSSSSTSSNCSSSSASSCQYFQSPHSTSNGTSAPASSSSGSNSATPLLEL 1323
            .|.::|.|:::::::::::|..|:..:|.....:..:         ...|||.:|....   ||.
  Fly   579 HNNNNSISNNNNNNNNNNNSILSDSEASETIKRKLDE---------LIEASSENGKRLR---LEA 631

  Fly  1324 QVDIADSAQPLNLSKK 1339
            .|.:|.| ..|:|:.|
  Fly   632 PVKVATS-NALDLTTK 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 39/82 (48%)
NR_LBD_REV_ERB 609..796 CDD:132738 18/186 (10%)
knrlNP_001303368.1 NR_DBD_like 12..96 CDD:295381 38/81 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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