DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip75B and Hr3

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001334718.1 Gene:Hr3 / 36073 FlyBaseID:FBgn0000448 Length:871 Species:Drosophila melanogaster


Alignment Length:973 Identity:235/973 - (24%)
Similarity:367/973 - (37%) Gaps:305/973 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ERQQD---IEREPSSSNSNSNSNSLTPQRYTHVQVQTVPPRQPTGLTTPGGTQKVILTPRVEY-- 107
            :|.:|   |::...:..|.|:|..                  ||.:.|...|...:...|.:.  
  Fly     2 DRPRDLLLIQQAKPAGGSKSSSGG------------------PTYIGTDAATAAAVANLRSKVPS 48

  Fly   108 -------VQQRATSSTGGGMKHVYSQQQGTAASRSAPPETTALL-------TTTSGT--PQIIIT 156
                   |.....:.:|.|       ..||..|..|||....|:       |.::||  |...||
  Fly    49 ISIIPLPVSTTIVARSGSG-------ASGTGGSGGAPPALPQLIQSSRSVSTKSTGTSPPLAFIT 106

  Fly   157 R-----TLPSNQHLSRRHSASPSALHHYQQQQP--------QRQQSPPPLHHQQQQQQQHVRVIR 208
            .     ..|:...|.|     |...|.|||...        .:|||....:.......|..:.:.
  Fly   107 EGSGTSGAPALTLLPR-----PQQQHQYQQTDKCTVLKLDVLKQQSGVAANSSSNTYLQIEQQLS 166

  Fly   209 DGRLYDEATVVVAARRHSVSP--------------PPLHHH------SR--SAPVSPV------- 244
            :....||....:|:...|..|              |....|      :|  |.|:|..       
  Fly   167 ELEAADEEEENMASLLGSAPPAQILANQPIIVKIEPTQSFHIVDEGDTRVLSLPLSDADKLGASW 231

  Fly   245 -----IA--RRGGAAAYMDQQYQQRQ---------TPPL---------APPPPPPPPPPPPPPPQ 284
                 ||  :.||.|..:|..::|..         .|.|         |...|.....|.||.|:
  Fly   232 IDLKDIAGLQAGGGATLLDVCFEQANEDGTIIATVQPDLENELEAELKAEGEPEDETEPEPPAPK 296

  Fly   285 QQQQQYISTGVPPPTAAARKFVVSTSTRHVNVIASNHFQQQQQQHQAQQHQQQHQQHQQHQQHVI 349
            :     ::|..|                                  ||...||.||.||.|...:
  Fly   297 R-----LATTRP----------------------------------AQSRPQQQQQQQQQQVKFL 322

  Fly   350 ASVSSSSSSSAIGSGGSSSSHIFRTPVVSSSSSSNMHHQQQQQQQQSSLGNSVMRPPPPPPP--- 411
            :...:.:.||:..|..|.||        .|:.||...:......|:.||..:..|.|||.||   
  Fly   323 SDPPALARSSSFSSLSSFSS--------ISNISSVCKNMASNTSQEGSLKRTKERTPPPMPPLTT 379

  Fly   412 ----------------PKVKHASSSSSGNSSSSNTNNSSSSSNGEEPSSSIPDLEFDGTTVLCRV 460
                            .....|::|::..|:..|:...||||:|.. .:....:|.    :.|:|
  Fly   380 HKPAATTTATSATSAAAATSAATASATATSARENSREHSSSSSGSN-GAMTAQIEI----IPCKV 439

  Fly   461 CGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMS 525
            ||||:||.||||.:|||||||||||....:.|: |.:|:||.:.|:||||||||||:||:.:|||
  Fly   440 CGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQ-CPRNKQCVVDRVNRNRCQYCRLQKCLKLGMS 503

  Fly   526 RDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDD------------------------- 565
            ||||:|||:.|:::.::   ..:...:|.|.||.:....|                         
  Fly   504 RDAVKFGRMSKKQREKV---EDEVRFHRAQMRAQSDAAPDSSVYDTQTPSSSDQLHHNNYNSGGY 565

  Fly   566 -------------------------------------QPR-------------------LLAAVL 574
                                                 :||                   |:..:.
  Fly   566 SNNEVGYGSPYGYSASVTPQQTMQYDISADYVDSTTYEPRSTIIDPEFISHADGDINDVLIKTLA 630

  Fly   575 RAHLETCEFTKEKVSAMRQRARDCPSYSMPTLLACPLNPAPELQSEQ---EFSQRFAHVIRGVID 636
            .||..    |..|:.|:....|..|..|.       :.....|..|:   :.:::...:|:.:|:
  Fly   631 EAHAN----TNTKLEAVHDMFRKQPDVSR-------ILYYKNLGQEELWLDCAEKLTQMIQNIIE 684

  Fly   637 FAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVM-RRDAIQNGANARF 700
            ||.:||||..|:|||:..|||.|.|:...||:..:.|.|.|::  |.|.|| .::|.....:...
  Fly   685 FAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRLLDLSQNAV--LYGDVMLPQEAFYTSDSEEM 747

  Fly   701 -LVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYS-RLKGCLQYIVAQNR 763
             ||...|..|:.:..:.||:.|:.|:.::||:.|:|.|:|....|::::: .:....|.:...:.
  Fly   748 RLVSRIFQTAKSIAELKLTETELALYQSLVLLWPERNGVRGNTEIQRLFNLSMNAIRQELETNHA 812

  Fly   764 PDQPE--FLAKLLETMPDLRTLSTLHTEKLVVFRTEHKEL----LRQQMWSMEDGNNSDGQQN 820
            |.:.:  .|..||..:|:.|.:|.||.|.|..|:.:|..:    |.::::|:      |.||:
  Fly   813 PLKGDVTVLDTLLNNIPNFRDISILHMESLSKFKLQHPNVVFPALYKELFSI------DSQQD 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 52/87 (60%)
NR_LBD_REV_ERB 609..796 CDD:132738 57/194 (29%)
Hr3NP_001334718.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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