DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip75B and pparda

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:XP_699900.6 Gene:pparda / 30750 ZFINID:ZDB-GENE-990415-212 Length:496 Species:Danio rerio


Alignment Length:449 Identity:134/449 - (29%)
Similarity:227/449 - (50%) Gaps:81/449 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 QQQQQQQQSSLGNSVMRPPPPPPPPKVKHASSSSSGNSSSSNTNNSSSSS----NGEEPSSSIPD 448
            :..:|::||:                    :||:|.:.||::|:.|::.|    .|.|       
Zfish    83 ETSRQEEQSN--------------------TSSTSPDRSSASTDLSTALSEQLLRGRE------- 120

  Fly   449 LEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQY 513
             |..|..:.||:|||:|||||||||:||||||||||:|:.|::|..|.::  |.|.:.:||:||:
Zfish   121 -EVSGINMECRICGDRASGFHYGVHACEGCKGFFRRTIRMKLEYERCERS--CKIQKKSRNKCQF 182

  Fly   514 CRLKKCIAVGMSRDAVRFGRVPKREKARILAAM---QQSTQNRGQQRALATELDDQPRLLAAVLR 575
            ||.:||:.:|||.||:|:||:|:.||.:::|.:   ::.:||..:        .|...|...|..
Zfish   183 CRFQKCLMLGMSHDAIRYGRMPEAEKRKLVAGLLAGERGSQNSNE--------SDLKTLAKRVNN 239

  Fly   576 AHLETCEFTKEK----VSAMRQRARDCPSYSMPTLLACP--------LNPAPELQSEQEFSQRFA 628
            |:|:....||:|    ::.....:.....:.|.:|:...        ::.||   ..:|..   .
Zfish   240 AYLKNLNMTKKKARNILTGKTSASTPFVIHDMDSLVQAENGLVWNQVIHGAP---PNKEIG---V 298

  Fly   629 HV-----------IRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSIICL 682
            ||           :|.:.:|:..||||..|..:|:.||||.|:.:|:|..|..:.:.  :.::..
Zfish   299 HVFYRCQCTTVETVRELTEFSKSIPGFIDLFLNDQVTLLKYGVHEAIFAMLPSLMNK--DGLLVA 361

  Fly   683 NGQVMRRDAIQNGANARF--LVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIE 745
            ||:..............|  :::..|.||.:.|::.|.|:::.||.|.:::..|||||.|:..:|
Zfish   362 NGRGFVTREFLRSLRKPFSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLMNVHQVE 426

  Fly   746 KMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLV--VFRTEHKELL 802
            |:...:...|...:..|.||......:||:.:.|||.|.| ...:||  :.:||.:..|
Zfish   427 KIQDSILQALNQHLQLNHPDGRFIFPRLLQKLADLRQLVT-ENAQLVQKIKKTESETSL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 50/87 (57%)
NR_LBD_REV_ERB 609..796 CDD:132738 54/209 (26%)
ppardaXP_699900.6 NR_DBD_Ppar 128..211 CDD:143523 49/84 (58%)
NR_LBD_PPAR 228..495 CDD:132730 67/266 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26498
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.