Protein Alignment Eip75B and Rarb

DIOPT Version :9

• Sequence 1: NP_001246821.1
• Gene: Eip75B / 39999
• FlyBaseID: FBgn0000568
• Length: 1412
• Species: Drosophila melanogaster
• Sequence 2: XP_017455067.1
• Gene: Rarb / 24706
• RGDID: 3535
• Length: 455
• Species: Rattus norvegicus
• Alignment Length: 527
• Identity: 163/527 - (30%)
• Similarity: 238/527 - (45%)
• Gaps: 106/527 - (20%)

  Fly   366 SSSSHIFRTPVVSSSSSSNMHHQQQQQQQQSSLGNSVMRPPP---PP-------PPPKVKHASSS 420
            |||||....|.|    ..:|.|..             ..|.|   ||       ||....|....
  Rat     2 SSSSHACPVPAV----RGHMTHYP-------------AAPYPLLFPPVIGGLSLPPLHGLHGHPP 49

  Fly   421 SSGNSSSSNTNNSSSSSNGEE----PSSSIPDLEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGF 481
            .||.|:.|.....:.|::.||    |.|.:|.   ......|.||.||:||:||||.:|||||||
  Rat    50 PSGCSTPSPATIETQSTSSEELVPSPPSPLPP---PRVYKPCFVCQDKSSGYHYGVSACEGCKGF 111

  Fly   482 FRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAM 546
            ||||||:.:.| .|.:::.|.|.::.|||||||||:||..||||:::||..|..|::
  Rat   112 FRRSIQKNMIY-TCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKK-------- 167

  Fly   547 QQSTQNRGQQRALATELDDQPRLLAAVLRAHLET----CEFTKEKV-SAMRQRARDCPSYSMPTL 606
            :.|.|...:...:..||||   |...:.:||.||    |:..|... |:...|.|
  Rat   168 EPSKQECTESYEMTAELDD---LTEKIRKAHQETFPSLCQLGKYTTNSSADHRVR---------- 219

  Fly   607 LACPLNPAPELQSEQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICM 671
                    .:|....:||:.....|..:::||..:|||..||..|:.|||||...|.|.:|:...
  Rat   220 --------LDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTR 276

  Fly   672 FDSSINSIICLNGQVMRRDAIQNGANARF--LVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPD 734
            :....:::...:|..:.|..:.   ||.|  |.|..|.||.::..:.:.|.|.||..||.||..|
  Rat   277 YTPEQDTMTFSDGLTLNRTQMH---NAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGD 338

  Fly   735 RPGLRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLVVFRTE-- 797
            |..|.....::|:...|...|:..:.:.||.:|....|:|..:.|||::|....|:::..:.|
  Rat   339 RQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIP 403

  Fly   798 --HKELLRQQMWSMEDGNNSDGQQNKSP--SGSWADAMDVEAAKSPLGSVSSTESADLDYGSPSS 858
              ...|:::.:      .||:|.:..:|  ||:.|:       .||  ||           ||||
  Rat   404 GSMPPLIQEML------ENSEGHEPLTPNSSGNTAE-------HSP--SV-----------SPSS 442

  Fly   859 SQPQGVS 865
            .:..|||
  Rat   443 VETSGVS 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Eip75B	NP_001246821.1	NR_DBD_REV_ERB	453..541	CDD:143540	47/87 (54%)
		NR_LBD_REV_ERB	609..796	CDD:132738	54/188 (29%)
Rarb	XP_017455067.1	NR_DBD_RAR	82..166	CDD:143522	46/84 (55%)
		NR_LBD_RAR	186..416	CDD:132735	67/259 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24082
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	3.010