DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip75B and Thra

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001300912.1 Gene:Thra / 21833 MGIID:98742 Length:492 Species:Mus musculus


Alignment Length:527 Identity:142/527 - (26%)
Similarity:227/527 - (43%) Gaps:87/527 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 PPKVKHASSSSSGNSSSSNTNNSSSSSNGEEP-----SSSIPD-LEFDGTTVLCRVCGDKASGFH 469
            |.||:  ..|....:|:.:.:......||:.|     |..||. |:.|..   |.||||||:|:|
Mouse     5 PSKVE--CGSDPEENSARSPDGKRKRKNGQCPLKSSMSGYIPSYLDKDEQ---CVVCGDKATGYH 64

  Fly   470 YGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSIL-RINRNRCQYCRLKKCIAVGMSRDAV--RF 531
            |...:||||||||||:||:.:......|...|.:: :|.||:||.||.||||||||:.|.|  ..
Mouse    65 YRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDS 129

  Fly   532 GRVPKREKARILAAMQQSTQNRGQQ---RALATELDDQPR---LLAAVLRAHLETCEFTKEKVSA 590
            .||.||:      .::|:.:.|.::   |:|....:..|.   |:.....||    ..|..:.|.
Mouse   130 KRVAKRK------LIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHVATEAH----RSTNAQGSH 184

  Fly   591 MRQRARDCP-SYSMPTLLACPLNPAPELQSEQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDDKFT 654
            .:||.:..| ......:::.|.....:|::..||::.....|..|:|||..:|.|..|..:|:..
Mouse   185 WKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQII 249

  Fly   655 LLKAGLFDALFVRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTFNFAERMNSMNLTD 719
            |||....:.:.:|....:|...:::.......::|:.::|| ....:.|:.|...:.:::.||.|
Mouse   250 LLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNG-GLGVVSDAIFELGKSLSAFNLDD 313

  Fly   720 AEIGLFCAIVLITPDRPGLRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLS 784
            .|:.|..|::|::.||.||..::.|||.........::.|...:.:.|.|..|||  |.:....|
Mouse   314 TEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKLL--MKEREVQS 376

  Fly   785 TLHTEKLVVFRTEHKELLRQQMWSMEDGNNSDGQQNKS----PSGSWADAM------DVEAAKSP 839
            ::                      :..|..::|:...|    |.|.....|      .|...:..
Mouse   377 SI----------------------LYKGAAAEGRPGGSLGVHPEGQQLLGMHVVQGPQVRQLEQQ 419

  Fly   840 LGSVSSTESADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGGCPLRNRANSGSSG 904
            ||...|.....|.:.||.|           |||:         ||......|. |.:||..|...
Mouse   420 LGEAGSLRGPVLQHQSPKS-----------PQQR---------LLELLHRSGI-LHSRAVCGEDD 463

  Fly   905 DSGAAEM 911
            .|.|:.:
Mouse   464 SSEASSL 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 45/90 (50%)
NR_LBD_REV_ERB 609..796 CDD:132738 45/186 (24%)
ThraNP_001300912.1 Modulating 1..52 13/48 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 7/29 (24%)
NR_DBD_TR 52..138 CDD:143519 45/94 (48%)
NR_LBD_TR 162..370 CDD:132733 52/214 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 457..492 4/14 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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