DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip75B and Rxrb

DIOPT Version :10

Sequence 1:NP_730321.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001192143.1 Gene:Rxrb / 20182 MGIID:98215 Length:524 Species:Mus musculus


Alignment Length:643 Identity:159/643 - (24%)
Similarity:233/643 - (36%) Gaps:189/643 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 PPLHHQQQ------QQQQHVRVIRDGR-----LYDEATVVVAARRHSVSPPPLHHHSRSAPVSPV 244
            ||.|...|      :::.|..|....|     |...|....|..:.::.|.|           ..
Mouse    11 PPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAGEQQALEPEP-----------GE 64

  Fly   245 IARRGGAAAYMDQQYQQRQTP--------PLAPPPPP----PPPPPPPPPPQQQQQQYIST---- 293
            ..|.|...:..|.:.....:|        |.:||.||    .||||.||||.......||:    
Mouse    65 AGRDGMGDSGRDSRSPDSSSPNPLSQGIRPSSPPGPPLTPSAPPPPMPPPPLGSPFPVISSSMGS 129

  Fly   294 -GVPPPTAAARKFVVSTSTRHVNVIASNHFQQQQQQHQAQQHQQQHQQHQQHQQHVIASVSSSSS 357
             |:|||  |...|....|:..:|                                         |
Mouse   130 PGLPPP--APPGFSGPVSSPQIN-----------------------------------------S 151

  Fly   358 SSAIGSGGSSSSHIFRTPVVSSSSSSNMHHQQQQQQQQSSLGNSVMRPPPPPPPPKVKHASSSSS 422
            :.::..|||......:.||                     ||...:..||||..|        .:
Mouse   152 TVSLPGGGSGPPEDVKPPV---------------------LGVRGLHCPPPPGGP--------GA 187

  Fly   423 GNSSSSNTNNSSSSSNGEEPSSSIPDLEFDGTTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQ 487
            |..                               ||.:|||::||.||||:|||||||||:|:|:
Mouse   188 GKR-------------------------------LCAICGDRSSGKHYGVYSCEGCKGFFKRTIR 221

  Fly   488 QKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQN 552
            :.:.| .|..|:.|::.:..||||||||.:||:|.||.|:||:..|             |:....
Mouse   222 KDLTY-SCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEER-------------QRGKDK 272

  Fly   553 RGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKVSAMRQRARDCPSYSMPTLLACPLNPAPEL 617
            .|.........::.|  :..:|.|.|...:.:.:.|...........|.:.|....|      :.
Mouse   273 DGDGDGAGGAPEEMP--VDRILEAELAVEQKSDQGVEGPGATGGGGSSPNDPVTNIC------QA 329

  Fly   618 QSEQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFV----RLICMFDSSINS 678
            ..:|.|:         ::::|..||.|..|..||:..||:||..:.|..    |.|.:.|    .
Mouse   330 ADKQLFT---------LVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRD----G 381

  Fly   679 IICLNG-QVMRRDAIQNGANARFLVDSTFN-----FAERMNSMNLTDAEIGLFCAIVLITPDRPG 737
            |:...| .|.|..|...|..|.|  |.:.:     ...:|..|.:...|:|...||:|..||..|
Mouse   382 ILLATGLHVHRNSAHSAGVGAIF--DRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKG 444

  Fly   738 LRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLVVFR 795
            |.|...:|.:..::...|:....|..|:|....||||..:|.||::.....|.|..|:
Mouse   445 LSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_730321.1 NR_DBD_REV_ERB 453..541 CDD:143540 43/87 (49%)
NR_LBD_REV_ERB 609..796 CDD:132738 54/197 (27%)
RxrbNP_001192143.1 Modulating. /evidence=ECO:0000250 1..191 53/293 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..167 43/209 (21%)
NR_DBD_RXR 191..266 CDD:143514 42/75 (56%)
Hinge 258..382 31/157 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..285 3/34 (9%)
NR_LBD_RXR_like 285..502 CDD:132741 60/239 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..323 2/22 (9%)

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