DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip75B and Rarg

DIOPT Version :10

Sequence 1:NP_730321.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_035374.3 Gene:Rarg / 19411 MGIID:97858 Length:458 Species:Mus musculus


Alignment Length:461 Identity:136/461 - (29%)
Similarity:209/461 - (45%) Gaps:85/461 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 QQQQSSLGNSVMRPPPPPPPPKVKHASSSSSGNSSSSNTNNSSSSSNGEEPSSSIPDLEFDGTTV 456
            :.|.:|....|...|.|||||:|                         .:|              
Mouse    64 ETQSTSSEEMVPSSPSPPPPPRV-------------------------YKP-------------- 89

  Fly   457 LCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIA 521
             |.||.||:||:||||.||||||||||||||:.:.| .|.:::.|.|.::.|||||||||:||..
Mouse    90 -CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVY-TCHRDKNCIINKVTRNRCQYCRLQKCFE 152

  Fly   522 VGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLET----CE 582
            ||||::|||..|..|:::.:        .:.......|:.:|::   |:..|.:||.||    |:
Mouse   153 VGMSKEAVRNDRNKKKKEVK--------EEGSPDSYELSPQLEE---LITKVSKAHQETFPSLCQ 206

  Fly   583 FTKEKVSAMRQRARDCPSYSMPTLLACPLNPAPELQSEQEFSQRFAHVIRGVIDFAGMIPGFQLL 647
            ..|...::........                 :|....:||:.....|..:::||..:|||..|
Mouse   207 LGKYTTNSSADHRVQL-----------------DLGLWDKFSELATKCIIKIVEFAKRLPGFTGL 254

  Fly   648 TQDDKFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVMRRDAIQNGANARF--LVDSTFNFAE 710
            :..|:.|||||...|.|.:|:...:....:::...:|..:.|..:.   ||.|  |.|..|.||.
Mouse   255 SIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMH---NAGFGPLTDLVFAFAG 316

  Fly   711 RMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLE 775
            ::..:.:.|.|.||..||.||..||..|...|.::|:...|...|:....:.||.||....::|.
Mouse   317 QLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLM 381

  Fly   776 TMPDLRTLSTLHTEKLVVFRTE----HKELLRQQMWS---MEDGNNSDGQQNKSPSGSWADAMDV 833
            .:.|||.:||...|:.:..:.|    ...|:|:.:.:   .||.::..|...|:.|...|.....
Mouse   382 KITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEMFEDDSSKPGPHPKASSEDEAPGGQG 446

  Fly   834 EAAKSP 839
            :..:||
Mouse   447 KRGQSP 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_730321.1 NR_DBD_REV_ERB 453..541 CDD:143540 49/87 (56%)
NR_LBD_REV_ERB 609..796 CDD:132738 55/188 (29%)
RargNP_035374.3 Modulating 1..89 10/49 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..83 6/18 (33%)
NR_DBD_RAR 85..165 CDD:143522 49/120 (41%)
Hinge 156..184 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..180 3/26 (12%)
NR_LBD_RAR 188..418 CDD:132735 66/252 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..458 10/44 (23%)

Return to query results.
Submit another query.