DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip75B and Ppard

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_035275.1 Gene:Ppard / 19015 MGIID:101884 Length:440 Species:Mus musculus


Alignment Length:450 Identity:139/450 - (30%)
Similarity:233/450 - (51%) Gaps:69/450 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 QQQQQQQSSLGNSVMRPPPPPPPPKVKHASSSSSGNSSSSNTNNSSSSSNGEEPSSSIPDLEF-- 451
            :::::::.::|:..         |::......:..:||.::.:.:||      |||.:..|:.  
Mouse    12 REEEKEEVAMGDGA---------PELNGGPEHTLPSSSCADLSQNSS------PSSLLDQLQMGC 61

  Fly   452 DGTT-----VLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRC 511
            ||.:     :.||||||||||||||||:||||||||||:|:.|::|..|  ::.|.|.:.|||:|
Mouse    62 DGASGGSLNMECRVCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKC--DRICKIQKKNRNKC 124

  Fly   512 QYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRA 576
            ||||.:||:|:|||.:|:||||:|:.||.:::|.:   |.:.|.|.  ..:|.|.......:..|
Mouse   125 QYCRFQKCLALGMSHNAIRFGRMPEAEKRKLVAGL---TASEGCQH--NPQLADLKAFSKHIYNA 184

  Fly   577 HLETCEFTKEKVSAM--RQRARDCP--SYSMPTL-----------LACPLNPAPELQSEQEFSQR 626
            :|:....||:|..::  .:.:.:.|  .:.:.||           |...|.|..|:.        
Mouse   185 YLKNFNMTKKKARSILTGKSSHNAPFVIHDIETLWQAEKGLVWKQLVNGLPPYNEIS-------- 241

  Fly   627 FAHV-----------IRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSII 680
             .||           :|.:.:||..||.|..|..:|:.||||.|:.:|:|..|..:.:.  :.::
Mouse   242 -VHVFYRCQSTTVETVRELTEFAKNIPNFSSLFLNDQVTLLKYGVHEAIFAMLASIVNK--DGLL 303

  Fly   681 CLNGQVMRRDAIQNGANARF--LVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLEL 743
            ..||...............|  :::..|.||.:.|::.|.|:::.||.|.:::..|||||.|:..
Mouse   304 VANGSGFVTHEFLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPQ 368

  Fly   744 IEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLV-VFRTEHKELL 802
            :|.:...:...|::.:..|.||......|||:.|.|||.|.|.|.:.:. :.:||.:.||
Mouse   369 VEAIQDTILRALEFHLQVNHPDSQYLFPKLLQKMADLRQLVTEHAQMMQWLKKTESETLL 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 55/92 (60%)
NR_LBD_REV_ERB 609..796 CDD:132738 54/200 (27%)
PpardNP_035275.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 8/55 (15%)
NR_DBD_Ppar 72..155 CDD:143523 54/84 (64%)
NR_LBD_PPAR 172..439 CDD:132730 67/267 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6008
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42959
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.960

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