DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip75B and nhr-51

DIOPT Version :10

Sequence 1:NP_730321.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_506898.2 Gene:nhr-51 / 180052 WormBaseID:WBGene00003641 Length:371 Species:Caenorhabditis elegans


Alignment Length:380 Identity:83/380 - (21%)
Similarity:137/380 - (36%) Gaps:113/380 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 CRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAV 522
            |.:|..||:|.||||.||..||.||.|.:.:.:.| .|.|..:|....|...:|:.||.:||:.:
 Worm     5 CLICHRKAAGQHYGVLSCFACKMFFHRMVVENLHY-CCQKFNKCYEKFIILPKCKACRYQKCLEM 68

  Fly   523 GMSRDAVRFGRVPKREKARILAAMQQSTQNRGQQRAL-ATELDDQPRLLAAVLRAHLETCEFTKE 586
            ||.       ..|:|.|     :.::|...:.|:..: .:|:|:|                    
 Worm    69 GMQ-------AFPRRVK-----SFEESMDLKIQRMLMNLSEMDEQ-------------------- 101

  Fly   587 KVSAMRQRARDCPSYSM--PTL---------LACPLNPAPELQSEQEFSQRFAHVIRGVIDFAGM 640
                  :..|...|||:  |:|         :.....|:.:..:..|::  |..|...:..|:  
 Worm   102 ------RHWRMLNSYSIEDPSLGDVLVDSNVMKIMRKPSNQKVTAHEWA--FLDVYSRISHFS-- 156

  Fly   641 IPGFQLLTQ----DDK----FTLLKAGLFDALFVRLICMFDSSINSIICL---NGQVMRRDAIQN 694
              .|:.:..    |.|    |..|:.|:|......|....|       ||   :|:.:..||:.|
 Worm   157 --NFEFMNNISFADRKLIFSFNCLRTGVFHGSMRTLREQRD-------CLLTPSGEDVYPDAVHN 212

  Fly   695 ------------------------GANARFLVDSTFNFAERMNSMNLTD------------AEIG 723
                                    ..|..:.:.|...|.....|.||:|            ....
 Worm   213 LFKDSPGLLNRTCCLLVSKLIELKVTNEEYQLLSLIFFCNPTISHNLSDFARNTLASHQIKYSSA 277

  Fly   724 LFCAIVLITPDRPGLRNLELIEKMY--SRLKGCLQYIVAQNRPDQPEFLAKLLET 776
            ||..:.:..|....:|..|||..::  :|:...:|::....:...|.|..|.|.|
 Worm   278 LFRHLQITNPGTAPVRFQELISLVHVINRVTNDMQHVSMMFQCMIPSFKFKQLVT 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_730321.1 NR_DBD_REV_ERB 453..541 CDD:143540 31/82 (38%)
NR_LBD_REV_ERB 609..796 CDD:132738 41/217 (19%)
nhr-51NP_506898.2 ZnF_C4 4..70 CDD:197701 26/65 (40%)
HOLI 144..307 CDD:214658 32/175 (18%)

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