DRSC/TRiP Functional Genomics Resources

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Protein Alignment Eip75B and nhr-7

DIOPT Version :9

Sequence 1:NP_001246821.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_502117.2 Gene:nhr-7 / 178035 WormBaseID:WBGene00003606 Length:536 Species:Caenorhabditis elegans


Alignment Length:593 Identity:136/593 - (22%)
Similarity:229/593 - (38%) Gaps:159/593 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   454 TTVLCRVCGDKASGFHYGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKK 518
            |..:|.||||..:..||||.:|.||||||||:::.......|...:.|.:.:..||.|:|||.:|
 Worm     5 TNRICAVCGDTPAKIHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVTKFERNACRYCRFRK 69

  Fly   519 CIAVGMSRDAVRFGRVPKREKAR----ILAAMQQSTQNRGQQRALATEL---DDQPRLLAAVLRA 576
            |:.|||:.|.||    |.|||::    :|      ::.:...|:|:..|   .|....|:...|.
 Worm    70 CLLVGMNPDYVR----PDREKSKKGKTVL------SKKKSVSRSLSYRLADPSDWTSFLSPSSRK 124

  Fly   577 HL-------ETC----------EFTKEKVSAMRQRAR--------DCPSYSMPTLLACPLNPAPE 616
            .|       |||          .|:.:.:.|.|..||        ||.:                
 Worm   125 QLSEIGKLAETCSTSTNFDGIGNFSLKSLIADRSLARKTGDSEAMDCSN---------------- 173

  Fly   617 LQSEQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDD---KFTLL-KAGLFDALFVRLICMFDSSIN 677
              |.::.:::|..:.| ::.....|..|.::.:::   ||::. |:.|.....:.|: :|:|:..
 Worm   174 --SPRQLNEQFLGIER-IVQCVDYIDRFLVMLEEEHCRKFSVEDKSALISDTMIHLL-LFESTSR 234

  Fly   678 SIICLNGQVMRRDAIQNGANARFLVDSTFNFAE-RMNSMNLTDAEIGLFCAIVLITPDRPGLRNL 741
            .:               ...|..|.|...:.|: .:.:.:||.....:|...:...|        
 Worm   235 FV---------------AKGAPGLEDLKLSLAQLPICTTHLTQKIADVFETYLRKPP-------- 276

  Fly   742 ELIEKMYSRLKGCLQYIV--AQN--------------RPDQPEFLAKLLETMPDLRTLSTLHTEK 790
            .:||  ||.||.   |||  |::              |.:..|.|.|:::...:..::|..::..
 Worm   277 SIIE--YSVLKA---YIVLSAESTVLSNSLNESLSLARENLSELLFKVIKHSRNKTSISAANSLS 336

  Fly   791 LVV-FRTEHKELL-----RQQMWSMEDGNNSDGQ----------QNKSPSGSWADAMDVEAAKSP 839
            .:: |..|.:.|.     .||.:.:.|   ||.:          .|...|.......:.....:.
 Worm   337 TILHFVYESRNLASRIRQSQQPFFVRD---SDPKIPFHKILTDIINPEVSDLLLTTANCRKLSTQ 398

  Fly   840 LGSVSS--------TESADLDYGSPSSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGGCPLRN 896
            :||..|        :::..|.:.||.|..|..:|.|.|||||.:.. |..|..::..:...|.::
 Worm   399 MGSSLSSVPPVPPPSDTVPLFHFSPPSLSPCQISAPPPPQQQYTDY-SQMPSTSSYPANSSPFQS 462

  Fly   897 --RANSGSSGDSGAAEMDIVGSHAHLTQNGLT-----------------ITPIVRHQQQQQQQQQ 942
              |.||.||......|| .......|..||:|                 :||:.......|...:
 Worm   463 PYRPNSLSSFPKIPLEM-TKSIEEFLRPNGMTTDEMNKPLEKNWADGFRLTPVFNKDIVSQFFPE 526

  Fly   943 IGILNNAH 950
            :..:|..|
 Worm   527 LSNINQHH 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_001246821.1 NR_DBD_REV_ERB 453..541 CDD:143540 39/86 (45%)
NR_LBD_REV_ERB 609..796 CDD:132738 36/208 (17%)
nhr-7NP_502117.2 NR_DBD_HNF4A 9..85 CDD:143518 35/79 (44%)
NR_LBD 188..339 CDD:299703 32/179 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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