DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip75B and ppara

DIOPT Version :10

Sequence 1:NP_730321.1 Gene:Eip75B / 39999 FlyBaseID:FBgn0000568 Length:1412 Species:Drosophila melanogaster
Sequence 2:XP_002940784.2 Gene:ppara / 100497346 XenbaseID:XB-GENE-480229 Length:474 Species:Xenopus tropicalis


Alignment Length:409 Identity:139/409 - (33%)
Similarity:206/409 - (50%) Gaps:47/409 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 GNSSSSNTNNSSSSSNGEEPSSS------------IPDLEFDGTTVLCRVCGDKASGFHYGVHSC 475
            |||..||.:.|:..::...|:||            ..|:......:.||||||||||||||||:|
 Frog    62 GNSPGSNGSVSTDLTDTLSPASSPASVTFPAAPGGAEDVSCKSLNLECRVCGDKASGFHYGVHAC 126

  Fly   476 EGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKA 540
            |||||||||:|:.|:.|..|  .:.|.|.:.|||:|||||.:||:.||||.:|:||||:|:.|||
 Frog   127 EGCKGFFRRTIRLKLAYERC--ERMCKIQKKNRNKCQYCRFEKCLNVGMSHNAIRFGRMPRSEKA 189

  Fly   541 RILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTKEKVSAMRQRARDCPSY---S 602
            ::.|.:|...|:...     ..:.|...|...:..|:|:.....|.|..|:.......|.:   .
 Frog   190 KLKAEVQTCDQDTKD-----APMGDLLSLARLIYDAYLKNFNMNKVKARAILTGKASNPPFVIHD 249

  Fly   603 MPTLLACPLNPAPELQS----EQEFSQRFAH--------VIRGVIDFAGMIPGFQLLTQDDKFTL 655
            |.||.........:|.:    .:|...|..|        .:..:.:||..||||..|..:|:.||
 Frog   250 METLCMAEKTLVAKLVANGIQNKEAEVRIFHCCQCTSVETVTELTEFAKSIPGFTELDLNDQVTL 314

  Fly   656 LKAGLFDALFVRLICMFDSSINSIICLNGQVMR------RDAIQNGANARFLVDSTFNFAERMNS 714
            ||.|:::|:|..|..:.:.....:...||.:.|      |..|.:      :::..|.||.:.|:
 Frog   315 LKYGVYEAMFAMLASVMNKDGMLVAYGNGFITREFLKSLRKPIGD------MMEPKFEFAMKFNA 373

  Fly   715 MNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYSRLKGCLQYIVAQNRPDQPEFLAKLLETMPD 779
            :.|.|:::.||.|.::...|||||.|:..||||...:...|:..:..|.||......|||:.|.|
 Frog   374 LELDDSDLSLFVAALICCGDRPGLVNVPSIEKMQESIVHVLKLHLQSNHPDDGFLFPKLLQKMAD 438

  Fly   780 LRTLSTLHTEKL-VVFRTE 797
            ||.|.|.|.:.: .:.:||
 Frog   439 LRQLVTEHAQLVQTIKKTE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip75BNP_730321.1 NR_DBD_REV_ERB 453..541 CDD:143540 54/87 (62%)
NR_LBD_REV_ERB 609..796 CDD:132738 58/205 (28%)
pparaXP_002940784.2 NR_DBD_Ppar 108..191 CDD:143523 55/84 (65%)
NR_LBD_PPAR 209..473 CDD:132730 71/255 (28%)

Return to query results.
Submit another query.