DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr92 and CMR1

DIOPT Version :10

Sequence 1:NP_649025.1 Gene:Wdr92 / 39997 FlyBaseID:FBgn0036771 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_010125.1 Gene:CMR1 / 851399 SGDID:S000002315 Length:522 Species:Saccharomyces cerevisiae


Alignment Length:341 Identity:78/341 - (22%)
Similarity:122/341 - (35%) Gaps:92/341 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEKKVAFKCGTFGAASLRNRHMAIGDFEGRLQ-----VLDMEQPDLPVYNVKAHNGIINTIDAIG 118
            :||...|..|.|.:          |||...::     |..|::.||.:|:|...|.|..|.:.|.
Yeast   135 LEKFKRFNNGNFSS----------GDFFEEIKKRQGDVTGMDEFDLDLYDVFQPNEIKITYERIS 189

  Fly   119 GTQIDCGAPE--IVTGSRDGAVKVWDIRQGQAPVVDMSPPPQMGDG-------VNNSSGRRDCWA 174
            .|.......:  |:.|...|.|..|::|  ..|:.| |...:|.:.       ...:.||.||:.
Yeast   190 ATYFHPAMEKKLIIAGDTSGTVGFWNVR--DEPLAD-SEEDRMEEPDITRVKLFTKNVGRIDCFP 251

  Fly   175 VAFGNTYNAEERIVAAGYDNGDLKIFDLRSLSVRWEATMKN------GICGLEFDRRDIPMNKLA 233
            .       ...:|:...|| |.::...|.:|......|:||      ||...:|...:  .|.|.
Yeast   252 A-------DTSKILLTSYD-GSIRSVHLNNLQSEEVLTLKNEYDDSLGISDCQFSYEN--PNVLF 306

  Fly   234 VTTLEGGLLVFDMRTQHPTKGFSYVEERNAGRSVGTNGVISGPKATVWVVRHLPQNRDLFLTGGG 298
            :|||.|....||.|    .|...|...|.|.:.:|:..:             .|.......||..
Yeast   307 LTTLGGEFTTFDTR----VKKSEYNLRRLADKKIGSMAI-------------NPMRPYEIATGSL 354

  Fly   299 TGSIRLW------------QYE-YPDRRVIDDSDGNKLGVAGALNMLSAATLSSQPVHCFDWHPD 350
            ..::::|            ||| ||...::...|          :.||.:.:|..|..       
Yeast   355 DRTLKIWDTRNLVKKPEWSQYEDYPSHEIVSTYD----------SRLSVSAVSYSPTD------- 402

  Fly   351 KLGLAVCGAFDQSVRV 366
              |..||..:|.::|:
Yeast   403 --GTLVCNGYDDTIRL 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr92NP_649025.1 WD40 77..366 CDD:475233 72/321 (22%)
WD40 repeat 111..165 CDD:293791 13/62 (21%)
WD40 repeat 173..210 CDD:293791 6/36 (17%)
WD40 repeat 217..256 CDD:293791 12/38 (32%)
WD40 repeat 280..333 CDD:293791 10/65 (15%)
WD40 repeat 342..366 CDD:293791 4/23 (17%)
CMR1NP_010125.1 WD40 234..521 CDD:475233 49/229 (21%)
WD40 repeat 244..281 CDD:293791 10/44 (23%)
WD40 repeat 293..329 CDD:293791 12/41 (29%)
WD40 repeat 336..376 CDD:293791 6/52 (12%)
WD40 repeat 393..436 CDD:293791 7/33 (21%)
WD40 repeat 447..478 CDD:293791
WD40 repeat 486..513 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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