DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr92 and AT2G43770

DIOPT Version :9

Sequence 1:NP_649025.1 Gene:Wdr92 / 39997 FlyBaseID:FBgn0036771 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_181905.1 Gene:AT2G43770 / 818980 AraportID:AT2G43770 Length:343 Species:Arabidopsis thaliana


Alignment Length:355 Identity:80/355 - (22%)
Similarity:134/355 - (37%) Gaps:125/355 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FVILGSKANGHGIMDIYELNQDKLVKVKSVEKKVAFKCGTFGAASLRNRHMAIGDFEGRLQVLDM 94
            |::|  |.:.:.|:|::..:....:...|.:|.|                 ...|.|...|:..|
plant    89 FMVL--KGHKNAILDLHWTSDGSQIVSASPDKTV-----------------RAWDVETGKQIKKM 134

  Fly    95 EQPDLPVYNVKAHNGIINTIDAIGGTQIDC----GAPEIVTGSRDGAVKVWDIRQGQAPVVDMSP 155
            .:          |:..:|:.         |    |.|.|::||.||..|:||:||..|       
plant   135 AE----------HSSFVNSC---------CPTRRGPPLIISGSDDGTAKLWDMRQRGA------- 173

  Fly   156 PPQMGDGVNNSSGRRDCWAVAFGNTYNAEERIVAAGYDNGDLKIFDLRSLSVRWEATMKNGICGL 220
                   :.....:....||:|.   :|.::|...|.|| |:|::|||    :.||||       
plant   174 -------IQTFPDKYQITAVSFS---DAADKIFTGGVDN-DVKVWDLR----KGEATM------- 216

  Fly   221 EFDRRDIPMNKLAVTTLEGGLLVFDMRTQHPTKGFSYVEERNAGRSVGTNGVISGPKATVWVVR- 284
                           ||||        .|....|.|...:   |..:.|||:.:  |..||.:| 
plant   217 ---------------TLEG--------HQDTITGMSLSPD---GSYLLTNGMDN--KLCVWDMRP 253

  Fly   285 HLPQNRDLFLTGGGTGSIRLWQYEYPDRRVIDDS---DGNKLGVAGALNML------SAATLSSQ 340
            :.||||.:.:..|       .|:.: ::.::..|   ||.|:....:..|:      |..|:...
plant   254 YAPQNRCVKIFEG-------HQHNF-EKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKL 310

  Fly   341 PVH------CFDWHPDKLGLAVCGAFDQSV 364
            |.|      |. :||.:..:..|.: |:::
plant   311 PGHTGSVNECV-FHPTEPIIGSCSS-DKNI 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr92NP_649025.1 WD40 <2..354 CDD:225201 78/343 (23%)
WD40 77..366 CDD:295369 72/308 (23%)
WD40 repeat 111..165 CDD:293791 15/57 (26%)
WD40 repeat 173..210 CDD:293791 13/36 (36%)
WD40 repeat 217..256 CDD:293791 6/38 (16%)
WD40 repeat 280..333 CDD:293791 14/62 (23%)
WD40 repeat 342..366 CDD:293791 6/29 (21%)
AT2G43770NP_181905.1 WD40 49..340 CDD:238121 80/355 (23%)
WD40 repeat 57..94 CDD:293791 2/6 (33%)
WD40 repeat 99..135 CDD:293791 8/52 (15%)
WD40 repeat 142..177 CDD:293791 15/57 (26%)
WD40 repeat 183..219 CDD:293791 18/65 (28%)
WD40 repeat 227..265 CDD:293791 14/42 (33%)
WD40 repeat 275..299 CDD:293791 5/23 (22%)
WD40 repeat 317..340 CDD:293791 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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