DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prestin and slc26a6

DIOPT Version :10

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001072916.2 Gene:slc26a6 / 780378 XenbaseID:XB-GENE-919879 Length:735 Species:Xenopus tropicalis


Alignment Length:708 Identity:218/708 - (30%)
Similarity:370/708 - (52%) Gaps:101/708 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 ALFTGVIPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAVFPVLAY 139
            :|....||||.|:|:|..|..|.|||:||.:|.|:.:|.|:||.:||||....|||.:.||||.|
 Frog    61 SLLLKFIPILGWIPRYPVREWLLGDIVAGLSVGIIQLPQGLAYALLAGVPPVYGLYSSFFPVLLY 125

  Fly   140 MFLGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLINSSALA 204
            ...|||:|||.|||||.|:|...|.::         ::|...:.|..|.|       |||.:|..
 Frog   126 AIFGTSRHISPGTFAVISVMVGSVTES---------LVPSELYTLPGNET-------LINITARD 174

  Fly   205 DSVSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPLVNGFTT 269
            :.                      ::.||::|...||:..:::..:::|.:.:.|||||:.|:|:
 Frog   175 ND----------------------RVAVASALTFLVGLFQIMLGLVQVGFVVTYLSEPLIRGYTS 217

  Fly   270 AAACHVVTAQLKDVLGISVPRHKGAFKIIYTVIDVIKGVPQTNLVNF---GFCMAVIAFMMICNE 331
            |||.||..:|:|.|||:.:.:......:||.::::...:|:||:.:.   |..:.|:..:...|:
 Frog   218 AAAIHVTVSQMKSVLGVQISQRSHPLSLIYAIVNLCAKLPETNIASLLIGGIAITVLFVVKFLND 282

  Fly   332 ILKPRLSKKCRFPLPAELIMVIGGTLISKWFNLYVDYNVNPVGKIPSGLPEPVLPRLDLVPKVAV 396
                :.|.|.|.|:|.|||.:|..|.||...||...|.|:.||:||:|:..|::|...:...|..
 Frog   283 ----KYSSKIRMPIPIELITLIVATGISYGANLNQVYGVDIVGEIPTGMKAPMVPNASIFASVVG 343

  Fly   397 DSIAIAIVTYSIIMSMGLTFAKKHGYEVRPNQELFAMGIGNMVGGCFSCIPMACSLSRSVIQDQT 461
            ::.|||:|.|:..:|:...||.||||.|..||||.|:|:.|.:|..|.|..:..::|||::|:.|
 Frog   344 NAFAIAVVVYAFTISLAKMFAVKHGYNVDSNQELIALGLSNSIGSFFQCFTIGTAMSRSLVQEST 408

  Fly   462 GGVSQIASLVSASLVVVTLMWIGPFFSSLPRCVLAGVIIVALKPMFMQAKELKKFSKQGKLEMFT 526
            ||.||:||.||:.::::.::..|..|.:||:.:||.|::|.||.::.|..::....:..|:::..
 Frog   409 GGHSQVASAVSSLVILIIILRAGELFQTLPKAILAAVVVVNLKGIYKQFTDVPMLWRSNKIDLLV 473

  Fly   527 WISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYSCLLGYMPEAPGIYMDLNQHRNAMQVPEV 591
            |:.|||..:::::||||.:.:..|||.:..:..||:..:||.: :...||.|:.|.....::..:
 Frog   474 WVVTFLATILLNLDIGLAVSVAFSLLTVIFRTQKPHYSILGKV-DNTDIYRDVAQFDQVTEIQGI 537

  Fly   592 RIFRYSGSLNFATSLFFRRALYEAVG--LDK-IPLTK---------------------------V 626
            :|||.|.:|.||.:..:..::....|  :|| |.|.|                           :
 Frog   538 KIFRSSCTLYFANANLYAESVKRMCGAEVDKLIELKKKAIKKQKQLQEKAEKQRKKENKRKEKEL 602

  Fly   627 SSSNSNSP-SKGSKSSYSPVSQNGGKAINGKLEETSG---------AFKVLVLDFSMLGHIDVAG 681
            .|..|||| :|..:...:|    |.:|:     |.:|         .|..|:||.|..|.:|...
 Frog   603 DSIVSNSPAAKEPEIQIAP----GYEAL-----EDAGLDYFGSEKCTFHSLILDLSTAGFLDTVS 658

  Fly   682 CRTLTDLSKELKVRGARLLL----ASPVDRVYDTLVHSMALSEGPFEIFPTLHDCVEY 735
            .:.|.::.::.:....::.|    ||.::::......|.::::.  .:|.::||.|.|
 Frog   659 IKVLKNIFRDFQEIDVQVYLTGCQASIIEQLDVGNFFSKSITKN--LLFNSVHDAVMY 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 PRK11660 82..731 CDD:481320 212/695 (31%)
slc26a6NP_001072916.2 PRK11660 68..711 CDD:481320 213/696 (31%)

Return to query results.
Submit another query.