DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prestin and slc26a6.1

DIOPT Version :10

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001410199.1 Gene:slc26a6.1 / 558704 ZFINID:ZDB-GENE-081105-83 Length:562 Species:Danio rerio


Alignment Length:629 Identity:191/629 - (30%)
Similarity:317/629 - (50%) Gaps:93/629 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 MAYGILAGVSAGNGLYMAVFPVLAYMFLGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPI 179
            ||..:|..|....|||.:.:|||.|...|||||||:||||:.|:|.                   
Zfish     1 MANALLTAVPPVFGLYSSFYPVLVYFVFGTSKHISVGTFAIMSVMV------------------- 46

  Fly   180 NAFGLQSNGTATASPLLLINSSALADSVSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVN 244
                    ||.||..||..:||                 ....:||. .::.:|:.|.:..|::.
Zfish    47 --------GTVTADVLLPGSSS-----------------TENQHADS-ARVALASQLTILCGLIQ 85

  Fly   245 LLMAFLRLGTLSSLLSEPLVNGFTTAAACHVVTAQLKDVLGISVPRHKGAFKIIYTVIDVIKGV- 308
            :::..||.|.:...||:|||:|:|||||.||...||..::|||:.||:|...:::....::.|: 
Zfish    86 IVLYVLRCGGVCRWLSKPLVSGYTTAAAVHVAINQLPLLMGISIQRHRGLLTVVWMFSSIVSGIR 150

  Fly   309 ---PQTNLVNFGFCMAVIAFMMICNEILKPRLSKKCRFPLPAELIMVIGGTLISKWFNLYVDYNV 370
               |.|.:|:|     :...:::..:::..|.|  .|||:|.||:::|..||.|...:|...|.:
Zfish   151 RVLPATLVVSF-----ISLVVLVGGKMVNSRWS--TRFPVPWELVLIIFATLSSVQLDLSGQYGI 208

  Fly   371 NPVGKIPSGLPEPVLPRLDLVPKVAVDSIAIAIVTYSIIMSMGLTFAKKHGYEVRPNQELFAMGI 435
            ..:|.||:||..|.||......::...::|:|:|.|....|:|:.||.||||....||||.|||:
Zfish   209 QIIGPIPTGLSPPSLPSFSFSQELVSTALALAVVGYGFQASLGMMFAHKHGYPFHSNQELLAMGL 273

  Fly   436 GNMVGGCFSCIPMACSLSRSVIQDQTGGVSQIASLVSASLVVVTLMWIGPFFSSLPRCVLAGVII 500
            .|.:||.|.|.|::.|:|||.:|:.|||.:|::||||:.::::.|:.:||.|..||:.|||.:|:
Zfish   274 CNSIGGVFQCFPVSGSISRSTVQESTGGKTQMSSLVSSLVILLILLKLGPLFQQLPKTVLAVIIL 338

  Fly   501 VALKPMFMQAKELKKFSKQGKLEMFTWISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYSCL 565
            |.|:.:|.|.||:.|.....::::..|:.|.|..::.::|:||.|.:..|||.:..:..:..|.:
Zfish   339 VNLQGVFAQVKEVPKLWNTDRMDLVVWVVTLLSALVFNLDLGLGIAVVFSLLTIVFRIQRAKSAI 403

  Fly   566 LGYMPEAPGIYMDLNQHRNAMQVPEVRIFRYSGSLNFATSLFFRRALYEAVGLDKIPLTKVSSSN 630
            ||:: .....|.||:::..|:|||.|.:|.....|.:|.:.....:|.:||              
Zfish   404 LGHI-AGTDCYRDLDKYSKAIQVPGVTVFSCFNPLYYANADQTFTSLKQAV-------------- 453

  Fly   631 SNSPSKGSKSS--YSPVSQNGGKAINGKLEETSGAFKVLVLDFSMLGHIDVAGCRTLTDLSKELK 693
                :||.|.:  ..|.:|.|          .|.|...::|:.|.:..:|.....:...:.::.:
Zfish   454 ----TKGIKENPEMCPPNQQG----------ASSAQHCVILELSGVTFMDSVAMGSFKSVLQDFE 504

  Fly   694 VRGARLLLASPVDRVYDTL-VHSMA---LSEGPFEIFPTLHDCV 733
            .:......|:..|.:...: .|.:.   ||...|  ||::|..|
Zfish   505 NKQTLFFCAASPDGLLSQMKSHGLVPDLLSLSSF--FPSVHHAV 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 PRK11660 82..731 CDD:481320 189/625 (30%)
slc26a6.1NP_001410199.1 PRK11660 1..545 CDD:481320 190/626 (30%)

Return to query results.
Submit another query.