DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prestin and si:ch211-117c9.2

DIOPT Version :9

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_685992.2 Gene:si:ch211-117c9.2 / 557779 ZFINID:ZDB-GENE-110408-11 Length:757 Species:Danio rerio


Alignment Length:806 Identity:243/806 - (30%)
Similarity:392/806 - (48%) Gaps:158/806 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LNNNNTNG---NGGSVPSKPKIQPKYSIHRDVLTHEVVIKQTGYAARDKSIP---------SSLR 65
            :.||.::|   :.|.         |:.:.|.:|..   :|....|...:.||         .|||
Zfish     1 MRNNTSSGVSKHAGE---------KHCMDRIILDE---LKLEDVAQWQREIPEPSLKEKIRDSLR 53

  Fly    66 NC----WRSWNFFALFTGVIPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAG 126
             |    |:.|     ....:|:|.|:|.||.|.:..||:::|.:|.||::|.||||.:||.|...
Zfish    54 -CTVGQWKVW-----ILAWMPVLSWIPCYSIRENGLGDLVSGVSVGIMHLPQGMAYALLASVPPV 112

  Fly   127 NGLYMAVFPVLAYMFLGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTAT 191
            .|||.:.:|||.|...|||||||||||||.|:|...|.:..|  .|.|.:         :|||  
Zfish   113 FGLYTSFYPVLVYFIFGTSKHISIGTFAVISIMIGSVSERLA--PDGHFL---------TNGT-- 164

  Fly   192 ASPLLLINSSALADSVSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLS 256
                   |...:.|:                .|..:.:::||.:..|..||..:|:..:|.|.:.
Zfish   165 -------NGLVVVDT----------------EARDLQRLKVAAATTLLCGIFQVLLGVVRFGFVV 206

  Fly   257 SLLSEPLVNGFTTAAACHVVTAQLKDVLGISVPRHKGAFKIIYTVIDVIKGVPQTNLVNFGFCMA 321
            :.||||||.|:||.||.|.:|||||.:.|:|..|..|..:::||::::...:|||::......:.
Zfish   207 TYLSEPLVRGYTTGAAAHAITAQLKYMFGVSPRRFTGPLQLLYTLVELCGLLPQTHVPTLVVSLV 271

  Fly   322 VIAFMMICNEILKPRLSKKCRFPLPAELIMVIGGTLISKWFNLYVDYNVNPVGKIPSGLPEPVLP 386
            .:..::|..|| ....|.:...|:|.||:::..|||||.:..:.....|:.||:||.||..|.:|
Zfish   272 SLTALVIVKEI-NSCYSHRLPLPIPIELMVITAGTLISHYTEMKTINGVDVVGEIPKGLMPPRVP 335

  Fly   387 RLDLVPKVAVDSIAIAIVTYSIIMSMGLTFAKKHGYEVRPNQELFAMGIGNMVGGCFSCIPMACS 451
            .:.....||.|:.|:|:|.|:|.:|:|..||.||||:|..||||.|:|:.|.:||.|.|..:..|
Zfish   336 EVCFFSSVAGDAFAVAVVGYAISISLGKIFALKHGYKVDSNQELVALGLSNTIGGFFQCYAVTSS 400

  Fly   452 LSRSVIQDQTGGVSQIASLVSASLVVVTLMWIGPFFSSLPRCVLAGVIIVALKPMFMQAKELKKF 516
            :|||:||:.|||.:|:|.|:||.:|::|::.:||.|..||..||:.::.|.||.||||.::|...
Zfish   401 MSRSLIQESTGGKTQVAGLISAVIVLITVLKLGPLFEELPTAVLSTIVFVNLKGMFMQCRDLPAL 465

  Fly   517 SKQGKLEMFTWISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYSCLLGYMPEAPGIYMDLNQ 581
            .:..|:::..|:.||||.|::::|:||...|..:||.:..:..:|...|||.:|:.. :|::...
Zfish   466 WRSNKVDLLVWLVTFLCTVLLNLDLGLAASITFTLLTVIFRTQRPRYSLLGRVPDTE-LYLETES 529

  Fly   582 HRNAMQVPEVRIFRYSGSLNFATSLFFRRALYEAVGLD--KIPLTKVSSSNSNSPSKG------- 637
            ::.|..:|.:.|||.|..:.:|.:..:..||.|..|::  ||...|..........||       
Zfish   530 YKAAKAIPGITIFRSSTMIYYANAELYHEALLEKSGINIPKILELKKRKEEEEKSKKGQAKDQDK 594

  Fly   638 ---------------------------SKSSYSPVSQNG----------------GK--AINGKL 657
                                       :.:|.:.|:|..                ||  ..:...
Zfish   595 QTGVLRELLNRMLVSLHHHETDHEHIVNDTSIATVTQGNTNCSFQSEQVTEEQEWGKTNTHSSSC 659

  Fly   658 EETSGAFKVLVLDFSMLGHIDVAGCRTLTDLSKE-------LKVRGARLLLASPVDRVYDTLVHS 715
            |:|..    ::||||.:..||....:|:.::.::       :.:.|.:..:...::|        
Zfish   660 EQTHS----IILDFSSVSFIDTVTLKTIQNICRDYAKVDVTVYISGCQACVVQQLER-------- 712

  Fly   716 MALSEGPF--------EIFPTLHDCV 733
                 |.|        .:||::||.|
Zfish   713 -----GGFFSGSVSKRRLFPSIHDAV 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 sulP 82..731 CDD:273284 223/717 (31%)
STAS_SulP_like_sulfate_transporter 582..730 CDD:132913 36/216 (17%)
si:ch211-117c9.2XP_685992.2 sulP 68..732 CDD:273284 224/718 (31%)
STAS_SulP_like_sulfate_transporter <660..729 CDD:132913 15/85 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 299 1.000 Domainoid score I1407
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 386 1.000 Inparanoid score I1977
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252952at33208
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 1 1.000 - - otm25589
orthoMCL 1 0.900 - - OOG6_100144
Panther 1 1.100 - - O PTHR11814
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1414
SonicParanoid 1 1.000 - - X49
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1212.000

Return to query results.
Submit another query.