DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prestin and CG6928

DIOPT Version :9

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_648539.1 Gene:CG6928 / 39367 FlyBaseID:FBgn0036240 Length:612 Species:Drosophila melanogaster


Alignment Length:711 Identity:164/711 - (23%)
Similarity:277/711 - (38%) Gaps:197/711 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 RSWNFFALFTGVIPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAV 133
            |.|.:     .::|.|:||..|: .:|...|:|||.||.:..:|.|:||..|||:....|||.|.
  Fly     4 RKWGY-----RLLPGLKWLHGYT-GQDAVADLIAGVTVGLTVLPQGLAYATLAGLEPQYGLYSAF 62

  Fly   134 FPVLAYMFLGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLI 198
            ...:.|..||:.:.::||..|:.::||::           |     ..|||.| |.|.|..|.||
  Fly    63 VGGIIYAMLGSCRQVTIGPTALLALMTSR-----------H-----TGFGLGS-GPAYAILLCLI 110

  Fly   199 NSSALADSVSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPL 263
            :                                         |:|.|.||.|:||.|..|:|.|:
  Fly   111 S-----------------------------------------GVVELGMAVLKLGALVDLISLPV 134

  Fly   264 VNGFTTAAACHVVTAQLKDVLGISVPRHKGAFKIIYTVIDVIKGVPQTNLVNFGFCMAVIAFMMI 328
            ..|||:|.|..:.|:|||.:||:   |.......|.|:..|...:.:....:|...:..|..:::
  Fly   135 TVGFTSATAVIIGTSQLKGLLGL---RGGSGSDFINTMRSVFGNLHKVRTGDFTLGLTSIIVLLL 196

  Fly   329 CNEILKPRLSKKCRFPLPAEL----IMVIGG------TLISKWFNLYVDYNVNP---------VG 374
            ..::...:|..:.|.....:|    |.|||.      .|::.    .:.|:...         .|
  Fly   197 LRKLKDVKLDGRIRNLRTQQLVSGSIWVIGTGRNALVVLVTS----VLAYSTCEQMESCPFILTG 257

  Fly   375 KIPSGLPEPVLPRL---------------------DLVPKVAVDSIAIAIVTYSIIMSMGLTFAK 418
            |:.||||...||:.                     :|.|.:.:..|...:...:|..:.|     
  Fly   258 KVKSGLPNVSLPKFETTILDRNGTEIRQNFEQMLSELGPSMLILPIIAVLGNVAISKAFG----- 317

  Fly   419 KHGYEVRPNQELFAMGIGNMVGGCFSCIPMACSLSRSVIQDQTGGVSQIASLVSASLVVVTLMWI 483
              |..:.|.:||.|:.:.|:.|...|.:|:..|.|||.:...:|..:.:....::.||::.|..:
  Fly   318 --GAGLSPTRELVALSMSNICGAFCSSMPVTGSFSRSAVNHASGVRTPLGGCYTSVLVLLALGLL 380

  Fly   484 GPFFSSLPRCVLAGVIIVALKPMFM-QAKELKKFSKQGKLEMFTWISTFLCVVIIDIDIGLLIGI 547
            .|:|..:|:..|:.|||.|:  :|| :.:.:|...:..:.|:.....||:..:.:.::||||:|:
  Fly   381 APYFQYIPKAALSAVIISAV--IFMIEFEVIKPLWRCSRRELLPGAITFVMSLAVGVEIGLLLGV 443

  Fly   548 CISLLALYIKGLKPYSCLLGYMPEAPGIYMDLNQHRNAMQVPEVRIFRYSGSLNFA------TSL 606
            ...:..|..:..:|                          |..|...:.:..:|:.      :||
  Fly   444 STDVAFLVYRAARP--------------------------VLSVSKLQTTNGINYILIRPKHSSL 482

  Fly   607 FFRRALYEAVGLDKIPLTKVSSSNSNSPSKGSKSSYSPVSQNGGKAINGKLEETSGAFKVLVLDF 671
            :|     .||...:..::|..:.:..:|                                :|||.
  Fly   483 YF-----PAVEWVRSGISKALTIHGTAP--------------------------------VVLDC 510

  Fly   672 SMLGHIDVAGCRTLTDLSKELKVRGARLLLASPVDRVYDTLVHSMALSEGPFEIFPTLHDC 732
            :.:...|....|.:..|.|||....|.|.|.| .|:....:     |.|.....|||: ||
  Fly   511 AHVHEFDFTAARGMGSLQKELAKANAPLFLMS-ADKTIGVI-----LKESTNIDFPTI-DC 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 sulP 82..731 CDD:273284 160/695 (23%)
STAS_SulP_like_sulfate_transporter 582..730 CDD:132913 29/153 (19%)
CG6928NP_648539.1 sulP 12..531 CDD:273284 148/656 (23%)
STAS_SulP_like_sulfate_transporter 471..>540 CDD:132913 19/105 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439038
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100144
Panther 1 1.100 - - P PTHR11814
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X49
76.740

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