DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prestin and CG5002

DIOPT Version :9

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_611262.1 Gene:CG5002 / 37025 FlyBaseID:FBgn0034275 Length:595 Species:Drosophila melanogaster


Alignment Length:637 Identity:146/637 - (22%)
Similarity:267/637 - (41%) Gaps:161/637 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 TGVIPILQWLPQYSPRRD-LPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAVFPVLAYMF 141
            |...|||:|||:|  |.: :..|.||||||.:..||..:|||::||:....|||.|......|:.
  Fly    34 TNKFPILKWLPRY--RLEYIMQDFIAGFTVGLTTIPQAIAYGVVAGLEPQYGLYSAFMGCFTYIV 96

  Fly   142 LGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLINSSALADS 206
            .|:.|.::|.|.|:.::|    |:.||                                      
  Fly    97 FGSCKDVTIATTAIMALM----VNQYA-------------------------------------- 119

  Fly   207 VSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPLVNGFTTAA 271
                ||||                :.|..:....|.:.||:..|.:|.|...:|.|::.|||.||
  Fly   120 ----TISP----------------DYAVLVCFLAGCIVLLLGLLNMGVLVRFISIPVITGFTMAA 164

  Fly   272 ACHVVTAQLKDVLGISVPRHK--GAFKIIYTVI------DVIKGVPQTNLVNFGFCMAVIAFMMI 328
            |..:.:||:.:::|::.|.:.  .|:|..:|.:      |.:.||  ::|| |...|..:..:..
  Fly   165 ATTIGSAQINNIVGLTSPSNDLLPAWKNFFTHLTSIRLWDALLGV--SSLV-FLLLMTRVKDIKW 226

  Fly   329 CNEILKPRLSKKCRFPLPAELIMVIGGTLISKWFNLYVDYN--VNPVGKIPSGLPEPVLPRL--- 388
            .|.|....|.      |....:.||.||.::  :.|..|.|  ....|.|.:|:|...||..   
  Fly   227 GNRIFWKYLG------LSRNALAVIFGTFLA--YILSRDGNQPFRVTGNITAGVPPFRLPPFSTT 283

  Fly   389 ---------DLVPKVAVDSIAIAIVTYSIIMSMGLTFAKKHGYEVRPNQELFAMGIGNMVGGCFS 444
                     :::..|.....:|.:::...|:::...|:|  |..|..:||:.|:|:.|::|....
  Fly   284 VDGEYVSFGEMISTVGASLGSIPLISILEIVAISKAFSK--GKIVDASQEMVALGMCNIMGSFVL 346

  Fly   445 CIPMACSLSRSVIQDQTGGVSQIASLVSASLVVVTLMWIGPFFSSLPRCVLAGVIIVALKPMFMQ 509
            .:|:..|.:|:.:.:.:|..:.:...|:.:||::.|.::...|..:|:|.||.:||.|:..: ::
  Fly   347 SMPVTGSFTRTAVNNASGVKTPLGGAVTGALVLMALAFLTQTFYFIPKCTLAAIIIAAMISL-VE 410

  Fly   510 AKELKKFSKQGKLEMFTWISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYSCLLGYMPEAPG 574
            ..::|...|..|.::|.::.|.|..:...::.|:|.||..:::.:.....:|:          ..
  Fly   411 LHKIKDMWKSKKKDLFPFVVTVLTCMFWSLEYGILCGIGANMVYILYSSARPH----------VD 465

  Fly   575 IYMD-LNQHRNAMQVPEVRIFRYSGSLNFATSLFFRRALYEAVGLDKIPLTKVSSSNSNSPSKGS 638
            |.:: :|.|       ||.:......|::|::.:.:..:...:.                     
  Fly   466 IKLEKINGH-------EVSVVDVKQKLDYASAEYLKEKVVRFLN--------------------- 502

  Fly   639 KSSYSPVSQNG--------GKAINGKLEETSGAFKVLVLDFSMLGHIDVAGC 682
                   :|||        |:.||      |..:.|.:...||.|.::...|
  Fly   503 -------NQNGETQLVVIKGEEIN------SIDYTVAMNIVSMKGDLEALNC 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 sulP 82..731 CDD:273284 145/633 (23%)
STAS_SulP_like_sulfate_transporter 582..730 CDD:132913 17/109 (16%)
CG5002NP_611262.1 SUL1 36..564 CDD:223732 145/635 (23%)
HCO3_cotransp 103..>385 CDD:304903 78/356 (22%)
STAS 469..>544 CDD:294402 18/114 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439040
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252952at33208
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100144
Panther 1 1.100 - - P PTHR11814
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1414
SonicParanoid 1 1.000 - - X49
98.780

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