DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prestin and Slc26a7

DIOPT Version :9

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_038965346.1 Gene:Slc26a7 / 297910 RGDID:1310846 Length:692 Species:Rattus norvegicus


Alignment Length:664 Identity:184/664 - (27%)
Similarity:312/664 - (46%) Gaps:92/664 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 IPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAVFPVLAYMFLGTS 145
            :|||:|.|||:.:.:|..|.::|..:|:..:..|:::.||:.|....|||.::||.:.|...|..
  Rat    32 LPILEWAPQYNLKENLLPDTVSGVLLAVQQVTQGLSFAILSSVHPVFGLYGSLFPAIIYAIFGMG 96

  Fly   146 KHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLINSSALADSVSST 210
            :|::.||||:.|:::|..|:         :::|      |||...|...    |||.|.      
  Rat    97 RHVATGTFALTSLISANAVE---------RLVP------QSNRNLTTQS----NSSVLG------ 136

  Fly   211 TISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPLVNGFTTAAACHV 275
             :|.|:|          .:|.||.:::...|::.|:|..|:||..:.||:||:::..||.||.||
  Rat   137 -LSEFEL----------QRIGVAAAVSFLGGVIQLVMFVLQLGNATFLLTEPVISAMTTGAATHV 190

  Fly   276 VTAQLKDVLGISVPRHKGAFKIIYTVIDVIKGVPQTNLVNFGFCMAVIAFMMICNEILKPRLSKK 340
            ||:|:|.:|||.:|...|.....|....|.:.:....|......:..|..:::..| |..:..:|
  Rat   191 VTSQVKYLLGIKMPYISGPLGFFYIYAYVFENIKSVQLEALLLSLLSIVVLVLVKE-LNEQFKRK 254

  Fly   341 CRFPLPAELIMVIGGTLISKWFNLYVDYNVNPVGKIPSGLPEPVLPRLDLVPKVAVDSIAIAIVT 405
            .:..||.:|:::|..:......|:...|.:..||:||.|:|.|..|.::::..|..::..:|:|.
  Rat   255 IKVVLPVDLVLIIAASFACYCTNMENTYGLEVVGRIPKGIPPPRAPPMNILSAVLTEAFGVALVG 319

  Fly   406 YSIIMSMGLTFAKKHGYEVRPNQELFAMGIGNMVGGCFSCIPMACSLSRSVIQDQTGGVSQIASL 470
            |...:::....|||..|.|..|||..|.|:.|::.....|||.|.::.|:.....||..:|:|.|
  Rat   320 YVASLALAQGSAKKFKYSVDDNQEFLAHGLSNVIPSFLFCIPSAAAMGRTAGLYSTGAKTQVACL 384

  Fly   471 VSASLVVVTLMWIGPFFSSLPRCVLAGVIIVALKPMFMQAKELKKFSKQGKLEMFTWISTFLCVV 535
            :|...|::.:..|||....||.||||.:|:|.||.|.:|.::|||:....|::...||||::..:
  Rat   385 ISCIFVLIVIYAIGPLLYWLPMCVLASIIVVGLKGMLIQFRDLKKYWNVDKIDWGIWISTYIFTI 449

  Fly   536 IIDIDIGLLIGICISLLALYIKGLKPYSCLLGYMPEAPGIYM-DLNQ---------HRNAMQVP- 589
            ....::|||.|:..::           :.:||..|.|..:.: |:.:         :.|....| 
  Rat   450 CFAANVGLLFGVVCTI-----------AIVLGRFPRAKTLSITDMKEMELKVKTETYDNTENWPP 503

  Fly   590 ----EVRIFRYSGSLNFATS-------------------------LFFRRALYEAVGLDKIPLTK 625
                .|::|  .|||...::                         |.|..|...:..|.||.|.:
  Rat   504 SKSTNVKVF--PGSLKTGSNVRSLSVTPRRMENSQQIKIISINNPLVFLNAKKFSADLMKIILKE 566

  Fly   626 VSSSNS-NSPSKGSKSSYSPVSQNGGKAINGKLEETSGAFKVLVLDFSMLGHIDVAGCRTLTDLS 689
            ...|.: :..||..:::......||...........|..:. |||:.|.|...|..|..||.:|.
  Rat   567 TDGSQALDDVSKCEQNTLLSPLPNGSCTEEASQPCPSEKYS-LVLNCSGLTFFDYTGVSTLVELY 630

  Fly   690 KELKVRGARLLLAS 703
            .:.|.|...:.||:
  Rat   631 LDCKSRSVDVFLAN 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 sulP 82..731 CDD:273284 184/663 (28%)
STAS_SulP_like_sulfate_transporter 582..730 CDD:132913 34/153 (22%)
Slc26a7XP_038965346.1 sulP 33..673 CDD:273284 184/663 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335183
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0659
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252952at33208
OrthoFinder 1 1.000 - - FOG0000041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11814
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X49
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

Return to query results.
Submit another query.