DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prestin and sulp-6

DIOPT Version :10

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_491138.3 Gene:sulp-6 / 189085 WormBaseID:WBGene00020914 Length:856 Species:Caenorhabditis elegans


Alignment Length:702 Identity:190/702 - (27%)
Similarity:334/702 - (47%) Gaps:73/702 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 WRSWNFFALFTGVIPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMA 132
            |:...:.....|.|||..|||:|:.:.:...|.:.|..|:::::|..:|||:|.||....||...
 Worm   101 WKRKEWIQFARGRIPITMWLPRYTWKSNFLVDFLGGLMVSVLSVPQSLAYGMLVGVPPSYGLITG 165

  Fly   133 VFPVLAYMFLGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLL 197
            :...:.|...|||||.|.|.||:.|:|...||:::.:|.             .:|||..::..||
 Worm   166 IIGPIIYALFGTSKHSSPGAFAIVSLMVGTVVESFGDVG-------------STNGTIDSNVDLL 217

  Fly   198 I---NSSALADSVSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLL 259
            .   |...::|.                     ..|.:|.|:.|.||:..:|...|..|.|:..|
 Worm   218 CCRENKPRVSDG---------------------DAIGIAASVTLLVGLFQILFGLLNAGLLAVWL 261

  Fly   260 SEPLVNGFTTAAACHVVTAQLKDVLGIS-VPRHKGAFKIIYTVIDVIKGVPQTNLVNFGFCMAVI 323
            |:.||.|..:.||.||:|:|||.:..|| ||.....|:.:...:...|.:|..:..:....:..:
 Worm   262 SDQLVQGLISGAAVHVLTSQLKSMTRISNVPPTSEPFQNVVFYMCFFKQMPDVDYASIIISVICV 326

  Fly   324 AFMMICNEILKPRLSKKCRFPLPAELIMVIGGTLISKWF-NLYVDYNVNPVGKIPSGLPEPVLPR 387
            ..::|...::.|.|.||.....|.||::|:..||...:. |...::.:..||::.||:|.||:|.
 Worm   327 VLLLISTLVIDPWLCKKVPVKFPMELVLVVSMTLTVHYTRNTAYEFQIPTVGQVTSGIPAPVIPP 391

  Fly   388 LDLVPKVAVDSIAIAIVTYSIIMSMGLTFAKKHGYEVRPNQELFAMGIGNMVGGCFSCIPMACSL 452
            :.....:...:::|||:::.|.:|:....:||..|.|..|||.||:|:.:.....|.|.....||
 Worm   392 MRNAFGMMGSAMSIAIISFVIHISLCKLISKKLQYVVNSNQEWFALGLMHTTSSFFGCFAGGSSL 456

  Fly   453 SRSVIQDQTGGVSQIASLVSASLVVVTLMWIGPF--FSSLPRCVLAGVIIVALKPMFMQAKELKK 515
            .|:::|.:.|..||:::|:: |:|::..:..|..  ...||:.|||.:::||:|.:|:|......
 Worm   457 GRTMMQVKCGTKSQLSTLIT-SIVLIIFVCGGAVGCIQHLPKPVLASIVVVAMKDLFIQIFTCFA 520

  Fly   516 FSKQGKLEMFTWISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYSCLLGYMPEAPGIYMDLN 580
            ..|...::...:.:||:.|::::::.|||||:...||.:.::.....|.|||.: .....|..|.
 Worm   521 LRKLSFVDYLIFAATFISVIVLNVNFGLLIGVVFELLTVVLRSQWADSSLLGRI-TGTNHYRRLG 584

  Fly   581 QHRNAMQVPEVRIFRYSGSLNFATSLFFRRALYEAVGLDKIPLT---KVSSSNSNSPSKGSKSSY 642
            .:..|..:|.::|||:...:.|..|..|.|.:::|.||:  ||.   ::.:.|....::..|...
 Worm   585 LYETANDIPGIKIFRFDSPIYFGNSEMFVRKIHQACGLN--PLIVRGELETENKKKDARKEKEEE 647

  Fly   643 -SPVSQNGGKAINGKLEETSGAFKVL---------------------VLDFSMLGHIDVAGCRTL 685
             :.:.:...|  ..|||.|:...|||                     ::|.|.:.::|:.|...|
 Worm   648 DAEIPKETEK--ETKLEVTTHQAKVLDEKHAEPEPNPADQYERLTHIIIDCSTIIYVDLMGQGAL 710

  Fly   686 TDLSKELKVRGARLLLASPVDRVYDTLVHSMALSEGP-FEIFPTLHDCVEYA 736
            .|:..:.|..|..:|.|:..:.|......|....|.| ..:|.::.|.|:.|
 Worm   711 KDVYNDYKTIGISVLFANTNEHVRQNFETSQFFEEVPRGRMFVSVSDAVDQA 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 PRK11660 82..731 CDD:481320 184/681 (27%)
sulp-6NP_491138.3 PRK11660 115..758 CDD:481320 184/682 (27%)

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