DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prestin and sulp-4

DIOPT Version :10

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_505989.1 Gene:sulp-4 / 179626 WormBaseID:WBGene00010788 Length:749 Species:Caenorhabditis elegans


Alignment Length:685 Identity:193/685 - (28%)
Similarity:342/685 - (49%) Gaps:68/685 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 NFFAL---FTGVIPILQWLPQYSPRRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAV 133
            :||||   ...:||||:|.|:|..:.||..|||.|.||.:|.:|.|:||.:||...|.||||.::
 Worm    83 SFFALKLFIFDLIPILKWFPEYKWKTDLSLDIIGGITVGVMQVPQGIAYALLAKQPAINGLYTSL 147

  Fly   134 FPVLAYMFLGTSKHISIGTFAVASMMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLI 198
            ||.|.||..|||:|.|:|||||.|:||...|:..|...|:.                        
 Worm   148 FPPLIYMLFGTSRHASLGTFAVVSLMTGLSVEKLAAPTDYD------------------------ 188

  Fly   199 NSSALADSVSSTTISPFQLLNSTLNADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPL 263
                 ..|.:.|.|...:|.:.|         ||:.::.:|:|::..:|..|||..|::.||:.:
 Worm   189 -----PSSFNETDIDLVKLPSPT---------EVSCAITITMGLILFVMGVLRLQFLTTYLSDQV 239

  Fly   264 VNGFTTAAACHVVTAQLKDVLGI-SVPRHKGAFKIIYTVIDVIKGVPQTNLVNFGFCMAVIAFMM 327
            :.|||..::.||:.:|||.:||| .:|||.|.|.:...:.|::..:.:.|.|:.|..:..|..:.
 Worm   240 IAGFTVGSSVHVLVSQLKTLLGIRGLPRHSGPFYLFRHLYDLVMSITRANPVSCGISIVSIIVLH 304

  Fly   328 ICNEILKPRLSKKCR--FPLPAELIMVIGGTLISKWFNLYVDYNVNPVGKIPSGLPEPVLPRLDL 390
            ...|.:.|.:.:|.:  .|:|.||::||..|:......:..:..|..|.|||.|:|...||...|
 Worm   305 FGKEFINPFIKRKTKSNIPIPWELVIVILSTVFVAVTGVDTEAKVQVVNKIPVGVPNFSLPSFYL 369

  Fly   391 VPKVAVDSIAIAIVTYSIIMSMGLTFAKKHGYEVRPNQELFAMGIGNMVGGCFSCIPMACSLSRS 455
            :|:|..|:|:|.:|:.|:.:|:....||::.||:...|||||:...::.......||.:|||||:
 Worm   370 IPQVLPDAISITVVSISVWLSISKMLAKRYNYELDSGQELFALSFASISSSFIPSIPNSCSLSRT 434

  Fly   456 VIQDQTGGVSQIASLVSASLVVVTLMWIGPFFSSLPRCVLAGVIIVALKPMFMQAKELKKFSKQG 520
            ::....|..:|::...|:.:|...::::|....:||...|:.:|.|||:.||.:..:|....|..
 Worm   435 LVAVGAGCTTQLSIFFSSLIVFSVVIFLGTLLETLPMAALSAIICVALQGMFRKFADLIDLWKVS 499

  Fly   521 KLEMFTWISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYSCLLGYMPEAPGIYMDLNQHRNA 585
            |::...|:.:.:..:::|:..||:|.:|.:|....::...|...||..: :....:.|..::...
 Worm   500 KIDFTIWVVSCVSTILLDVSTGLIISVCFALFTTILREQYPKWHLLASV-KGTQDFRDAERYGET 563

  Fly   586 MQVPEVRIFRYSGSLNFATSLFFRRALYEAVGLDKIPLTKVSSSNSNSPSKGSKSSYSPVSQNGG 650
            :....:.|||:...|.|.....|::::.:|       .|:...|:.....:..:.:......:|.
 Worm   564 VYFKGICIFRFDAPLLFHNVECFKKSIEKA-------YTEWQKSHEFYVLREERETILNTKLDGS 621

  Fly   651 -KAINGKLEETSGA----------FKVLVLDFSMLGHIDVAGCRTLTDLSKELKVRGARLLLA-- 702
             ::|:||:.:|:.:          .:..|:|.|....||:.|...|.::..:::.||..:..|  
 Worm   622 DESIDGKMFQTAQSTLNTHSPDILSRHFVIDCSGFTFIDLMGVSALKEIFSDMRKRGILVYFANA 686

  Fly   703 -SPVDRVYDTLVHSMALSEGPFEIFPTLHDCVEYA 736
             :||..:::.......:|:..|  :||:.|....|
 Worm   687 KAPVREMFEKCHFFNFVSKENF--YPTMRDATSIA 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 PRK11660 82..731 CDD:481320 186/665 (28%)
sulp-4NP_505989.1 PRK11660 96..715 CDD:481320 186/666 (28%)

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