DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prestin and slc26a4.1

DIOPT Version :9

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_017947806.2 Gene:slc26a4.1 / 100498507 XenbaseID:XB-GENE-22062177 Length:781 Species:Xenopus tropicalis


Alignment Length:761 Identity:214/761 - (28%)
Similarity:363/761 - (47%) Gaps:106/761 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KYSIHRDVLTHEVVIKQTGYAARDKS----IPSSLRNCWRSWNFFA--LFTGVIPILQWLPQYSP 92
            :|.:.|.:.|.....||....|..|:    ....||..:...:..|  :....||:|.|||:||.
 Frog    14 QYLLARPIYTQPTFEKQNMEKAPKKNTRKVFQKRLRKTFSCTSAKAVHMVKKYIPLLDWLPKYSW 78

  Fly    93 RRDLPGDIIAGFTVAIMNIPHGMAYGILAGVSAGNGLYMAVFPVLAYMFLGTSKHISIGTFAVAS 157
            :.....|:::|.:..::....|:|:.:||.|..|.|:|.:.||:|.|.|||||||||:|.|.|.|
 Frog    79 KSLFVHDLVSGVSTGLVGTLQGLAFALLAEVPVGYGIYSSFFPILTYFFLGTSKHISVGPFPVIS 143

  Fly   158 MMTAKVVDTYANVDDHHQILPINAFGLQSNGTATASPLLLINSSALADSVSSTTISPFQLLNSTL 222
            :|...||.:.|         |...|             ::.|::    :::.||    :::..| 
 Frog   144 LMVGSVVLSMA---------PDKNF-------------IVYNTT----NINETT----EMIIDT- 177

  Fly   223 NADPITKIEVATSLALTVGIVNLLMAFLRLGTLSSLLSEPLVNGFTTAAACHVVTAQLKDVLGIS 287
            .|....::.|:.:|:..:||:.|::..|:.|.:...|:||||.||||.||.....:|:|.:|.:.
 Frog   178 EARDAARVLVSGTLSFLIGIIQLVLGALQFGFIIRYLAEPLVRGFTTGAAFQAFISQVKLILNVP 242

  Fly   288 VPRHKGAFKIIYTVIDVIKGVPQTNLVNFGFCMAVIAFMMICNEI--LKPRLSKKCRFPLPAELI 350
            ...:.|.....||:.|:...:.:||:.:.   :|.:..:.:|..:  :..|.....|.|:|.|:|
 Frog   243 TNTYSGVLSTFYTMSDIFSNISKTNVADL---LAGLLAIFVCVAVKEINERYKHVLRIPIPIEII 304

  Fly   351 MVIGGTLISKWFNLYVD----YNVNPVGKIPSGLPEPVLPRLDLVPKVAVDSIAIAIVTYSIIMS 411
            :    :||:.|.:...|    ||...|..||||...|:.|.:.:.|::...:|:|.||.|::.:|
 Frog   305 V----SLIAAWISYGADLENKYNAGTVKNIPSGFIPPMTPDVSMFPQIIGSAISIGIVAYAVAVS 365

  Fly   412 MGLTFAKKHGYEVRPNQELFAMGIGNMVGGCFSCIPMACSLSRSVIQDQTGGVSQIASLVSASLV 476
            :|..||.|:.|.:..|||..|.||.|:..|.|||.....:|||:.||:.|||.:|||.|:||:.|
 Frog   366 LGKVFATKYNYVIDGNQEFVAFGISNIFSGVFSCFCATTALSRTAIQESTGGKTQIAGLISAATV 430

  Fly   477 VVTLMWIGPFFSSLPRCVLAGVIIVALKPMFMQAKELKKFSKQGKLEMFTWISTFLCVVIIDIDI 541
            ::|:..:|.|...|.:.|||.::|..||.||.||.::.:..||.|.:...||......:|:|:|:
 Frog   431 IITMFVLGQFLQPLQKSVLAAIVISNLKGMFWQALDIPRLWKQNKWDAAIWIFACFSTIILDLDL 495

  Fly   542 GLLIGICISLLALYIKGLKPYSCLLGYMPEAPGIYMDLNQHRNAMQVPEVRIFRYSGSLNFATSL 606
            |||.|:...|..:.::...|....||.:| ...||.||.:::|.::...::|.|:|..:.:....
 Frog   496 GLLSGLLFGLFTVILRIQFPSCHSLGNVP-GTEIYRDLKKYKNVVEQEGIKIIRFSSGIFYGNVD 559

  Fly   607 FFRRALYEAVGLDKIPL--------TKVS----------SSN---SNSPSKGSKSSYSPVSQNGG 650
            .|:..:...|..|.:.:        .|:|          :.|   :|..::..:|.:...||. .
 Frog   560 SFKNGITSIVEFDPVNVFNKRVKAQLKISELIKQGQLRVTKNGIMTNKITEDEQSEFEEDSQQ-Y 623

  Fly   651 KAINGKLEETSGAFKV-------------------LVLDFSMLGHIDVAGCRTLTDLSKELKVRG 696
            :.:..|.||..  |:|                   ::|||..:..:||....:|..:.|:.:...
 Frog   624 ENLQNKNEEME--FQVDWNSDLPVLNTVPKIFIHSIILDFGHVNFLDVVAVTSLKMILKDFRRIA 686

  Fly   697 ARLLLASPVDRVYDTLVHSMALSEGPFE-------IFPTLHDCVEY 735
            ..:..|...|.:::.|  .|.   |.||       .|.::|:.|.|
 Frog   687 VDVYFAGCDDDIFEKL--EMC---GFFEDNNKSDICFLSVHEAVIY 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 sulP 82..731 CDD:273284 200/701 (29%)
STAS_SulP_like_sulfate_transporter 582..730 CDD:132913 34/194 (18%)
slc26a4.1XP_017947806.2 Sulfate_transp 82..482 CDD:395733 141/437 (32%)
STAS_SulP_like_sulfate_transporter 535..719 CDD:132913 33/191 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252952at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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