DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prestin and slc26a4.2

DIOPT Version :10

Sequence 1:NP_649024.1 Gene:Prestin / 39996 FlyBaseID:FBgn0036770 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_031754875.1 Gene:slc26a4.2 / 100485000 XenbaseID:XB-GENE-22062181 Length:389 Species:Xenopus tropicalis


Alignment Length:348 Identity:83/348 - (23%)
Similarity:150/348 - (43%) Gaps:59/348 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 MVGGCFSCIPMACSLSRSVIQDQTGGVSQIASLVSASLVVVTLMWIGPFFSSLPRCVLAGVIIVA 502
            |.||.|||...:.:|||:.||:..||.:||||.|||.::::.::.:|.....|.:.||:.::||.
 Frog     1 MFGGAFSCFCASTALSRTAIQESIGGKTQIASAVSAGILLIAILALGKLLEPLQKSVLSAIVIVN 65

  Fly   503 LKPMFMQAKELKKFSKQGKLEMFTWISTFLCVVIIDIDIGLLIGICISLLALYIKGLKPYSCLLG 567
            ||.||...|::.:..|:.:.:..:|:.:.:..:|:.:|||||:|:...||.:.|:...|....||
 Frog    66 LKGMFWLIKDVPRLWKESRWDSVSWVVSCIAAIILGLDIGLLVGLLFGLLTVMIRVQFPSCSSLG 130

  Fly   568 YMPEAPGIYMDLNQHRNAMQVPEVRIFRYSGSLNFATSLFFRRALYEAVGLDKI--------PLT 624
            .: :...||.::..:::..:...::|.|:|.::.:......:..:...||.|.:        .|.
 Frog   131 NV-QGTDIYKNVKIYKHISEPAGMKIVRFSSAIFYGNVEGLKNGIKSIVGFDAVRVFNKRNKALR 194

  Fly   625 KVS--------SSNSN--------------------------SPSKGSKSSYSPVSQNGGKAING 655
            |:.        ||..|                          ||...:|.....|..|....:..
 Frog   195 KIKKLIKKGEISSLQNGTINNTGTDNEAFERDDDPEDQEKVDSPEVQTKEVEIQVDWNSELPVKV 259

  Fly   656 KLEETSGAFKVLVLDFSMLGHIDVAGCRTLTDLSKELKVRGARLLLASPVDRVYDTLVHSMALSE 720
            .:.:.|  ...::.||..:..:|....::|..:..|.:.......:|:..|.|.      ..:..
 Frog   260 SVPKVS--IHSIIFDFGQILFLDSVAMKSLKSIINEFRRIDVLPYIAACDDNVL------AQMER 316

  Fly   721 GPF-------EI-FPTLHDCVEY 735
            |.|       || |.|:||.|.|
 Frog   317 GNFFDDTIKPEICFMTVHDAVLY 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrestinNP_649024.1 PRK11660 82..731 CDD:481320 79/342 (23%)
slc26a4.2XP_031754875.1 PRK11660 <3..336 CDD:481320 79/341 (23%)

Return to query results.
Submit another query.