DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Cd82

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_113985.2 Gene:Cd82 / 83628 RGDID:69070 Length:266 Species:Rattus norvegicus


Alignment Length:254 Identity:73/254 - (28%)
Similarity:120/254 - (47%) Gaps:40/254 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFS---GAVYVLLVTSIIICL 71
            |.:..||.||:.|.:.|:.||::....:|.|.|:|....:|.|:..|   || ||.:....|..|
  Rat     5 CVKVTKYFLFLFNLLFFILGAVILGFGVWILADKSSFISVLQTSSSSLQVGA-YVFIGVGAITML 68

  Fly    72 VSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALY----G 132
            :.||||:||..||:|||..||:.:.|:.:..:..|||.|...::::|.|...:...:..|    .
  Rat    69 MGFLGCIGAVNEVRCLLGLYFVFLLLILIAQVTVGVLFYFNADKLKQEMGNTVMDIIQNYSVNAS 133

  Fly   133 SRREITQAWDLTQERLQCCGVDTWHDWNRYGPV---------PESC----------------CQE 172
            |.||  :|||..|.:::|||..:..:|.| .||         |.||                | |
  Rat   134 SSRE--EAWDYVQAQVKCCGWVSPSNWTR-NPVLKNSTKTTYPCSCEKTKEEDNQLIVKKGFC-E 194

  Fly   173 LFGGQRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFS-CL 230
            .......|.:  |....::.:||:.....:::::..::.|....||::.:.|:..| ||
  Rat   195 SDNSTASENS--PEDWPVHPEGCMEKAQAWLQENFGILLGVCAGVAVIELLGLFLSICL 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 72/250 (29%)
NET-5_like_LEL 110..207 CDD:239418 27/125 (22%)
Cd82NP_113985.2 Tetraspanin 24..253 CDD:459767 66/235 (28%)
CD37_CD82_like_LEL 106..228 CDD:239413 27/127 (21%)

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