DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan13a

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001002334.1 Gene:tspan13a / 798836 ZFINID:ZDB-GENE-040718-19 Length:203 Species:Danio rerio


Alignment Length:230 Identity:52/230 - (22%)
Similarity:82/230 - (35%) Gaps:65/230 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFV--KYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLG-TNLFS--GAVYVLLVTSIII 69
            ||.||  |..|.|.|.:..:...::..:..|        .:..| .:.||  |||   :...:.:
Zfish     3 CGGFVCSKTCLCILNLIYVLVSLLLIGVAAW--------GKWFGLVSSFSVMGAV---IAVGLFL 56

  Fly    70 CLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQ-------QTMRQEMRST 127
            .:|:.:|..||.|..:.||..|..|:.|||:               ||       ..:.:|.::.
Zfish    57 FIVAIIGLCGAVKHHQVLLFFYMFILFLVFI---------------VQFSVSCACLAINKEQQNL 106

  Fly   128 MALYGSRREITQAWDLTQERLQCCG---VDTWHDWNRYGPVPESCCQELFGGQRKECTIFPTITN 189
            :...|..:..:...|| :..|.||.   ||       |....|:.|       .||.|..|    
Zfish   107 LLEIGWNKSESMQSDL-ERSLNCCDFLQVD-------YSGSCEATC-------FKEKTCKP---- 152

  Fly   190 LYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFG 224
                 |..:...:..|....:||.|:..:...|.|
Zfish   153 -----CSVIIQAYADDALQFVGGISLFFSFTEILG 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 49/226 (22%)
NET-5_like_LEL 110..207 CDD:239418 20/106 (19%)
tspan13aNP_001002334.1 Tetraspanin 9..189 CDD:459767 48/224 (21%)

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