DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and UPK1B

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_008883.2 Gene:UPK1B / 7348 HGNCID:12578 Length:260 Species:Homo sapiens


Alignment Length:265 Identity:53/265 - (20%)
Similarity:93/265 - (35%) Gaps:81/265 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CCGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVS 73
            |||     ....|..:.||...    .:|:.|::.:..:::.      ||.::.:...|.:..:|
Human    24 CCG-----IALTAECIFFVSDQ----HSLYPLLEATDNDDIY------GAAWIGIFVGICLFCLS 73

  Fly    74 FLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQ---TMRQEMRSTMALYGS-- 133
            .||.||..|..:.:||.|||::.:|:...:...:..     ..||   |....::..:..|.:  
Human    74 VLGIVGIMKSSRKILLAYFILMFIVYAFEVASCITA-----ATQQDFFTPNLFLKQMLERYQNNS 133

  Fly   134 ---------RREITQAWDLTQERLQCCGVDTWHDWNRYG------------PVPESCCQELFGGQ 177
                     ...:|:.||....:..||||:...||.:|.            |.|..||       
Human   134 PPNNDDQWKNNGVTKTWDRLMLQDNCCGVNGPSDWQKYTSAFRTENNDADYPWPRQCC------- 191

  Fly   178 RKECTIFPTITNL-----------------YNQGCLYVTTNFIRDHA---AVIGGTSIAVAILMI 222
                    .:.||                 :||||..:.:..:..||   |..|...:.....::
Human   192 --------VMNNLKEPLNLEACKLGVPGFYHNQGCYELISGPMNRHAWGVAWFGFAILCWTFWVL 248

  Fly   223 FGMIF 227
            .|.:|
Human   249 LGTMF 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 50/260 (19%)
UPK1BNP_008883.2 Tetraspannin 10..258 CDD:278750 53/265 (20%)
uroplakin_I_like_LEL 118..230 CDD:239409 21/126 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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