DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and upk1b

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001037968.1 Gene:upk1b / 733741 XenbaseID:XB-GENE-988025 Length:259 Species:Xenopus tropicalis


Alignment Length:196 Identity:38/196 - (19%)
Similarity:74/196 - (37%) Gaps:49/196 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLWTLVDRSFVNELL-GTN---LFSGAVYVLLVTSIIIC 70
            |.|.:   :...|.|:.:.|..:....::.:.|:|.:..|| .||   :|: |.::.:.|.....
 Frog     9 CYQSI---IIFGNVVLGLCGVALTAECIFFVSDQSGIYPLLEATNNADIFA-AAWIGIFTGFCFF 69

  Fly    71 LVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQE--------MRST 127
            ::|.:|.:|..|..:.:|:.|.|::.:|:...:...:          ....||        ::..
 Frog    70 ILSIVGIIGIMKSNRRMLMVYLILMFVVYAFEVASAI----------TAATQENFFIPNLFLKQM 124

  Fly   128 MALYGSRRE-----------ITQAWDLTQERLQCCGVDTWHDWNRYG------------PVPESC 169
            :..|.:...           :|..|:.......||||:...||..|.            |.|:.|
 Frog   125 LDFYQNPNPTNNDNLWKINGVTNTWNRFMLLNGCCGVNGPQDWQTYTSVFRQSNSDSAYPWPQQC 189

  Fly   170 C 170
            |
 Frog   190 C 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 36/192 (19%)
NET-5_like_LEL 110..207 CDD:239418 16/92 (17%)
upk1bNP_001037968.1 Tetraspanin 13..>160 CDD:459767 26/160 (16%)
uroplakin_I_like_LEL 117..229 CDD:239409 14/74 (19%)

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