DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and prph2a

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:265 Identity:55/265 - (20%)
Similarity:103/265 - (38%) Gaps:72/265 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSFLG---C-- 77
            |::..:...:.|.:||.:.|:..::....:||:..|.......:|:...::.|.::..|   |  
Zfish    20 LWLMYWFSVMAGVLVFSMGLFFKIELRKRSELMDNNESHFVPNILIGVGLLACCLNAFGGKVCYD 84

  Fly    78 -VGAGKEVKC-LLLTYFIIVALVF-VTMLIGGVLGYVFRERVQQTMRQEMRSTMALY-----GSR 134
             :.:.|..|. .::|.|:|..||| ..:::...:.:..|..::.|:.:.:::.|..|     ..|
Zfish    85 SLDSSKYAKWKSIMTPFLICCLVFNFLLIVTAAMCFAMRIPLEFTLAEGLKNGMKYYKDTDTPGR 149

  Fly   135 REITQAWDLTQERLQCCGVDTWHDW-------NRY----------------------GPVPESCC 170
            ..:.:..||.|...:|||.:.:.||       |||                      ..||.|||
Zfish   150 CYMKRTLDLMQMEFRCCGNNNYKDWFEIQWVSNRYLDFSAKEVKDRISSNVDGKYLMDGVPFSCC 214

  Fly   171 QELFGGQRKECTIFPTIT---------------NLYNQGCLYVTTNFIRDH-AAVIGG--TSIAV 217
            ..   ...:.| |...||               |::.:||        ||. .:..||  .:|.|
Zfish   215 NP---SSPRPC-IQQQITNNSAHYSYDHYTEDLNIWKRGC--------RDALVSYYGGMMNTIGV 267

  Fly   218 AILMI 222
            .:|::
Zfish   268 LVLLV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 55/265 (21%)
NET-5_like_LEL 110..207 CDD:239418 30/146 (21%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 29/146 (20%)
peripherin_like_LEL 120..262 CDD:239415 32/153 (21%)

Return to query results.
Submit another query.