DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and cd81a

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:250 Identity:64/250 - (25%)
Similarity:111/250 - (44%) Gaps:59/250 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CGQFVKYSLFIANFVIFVGGAIVFCLTLW--------TLVDRSFVNELLGTNLFSGAVYVLLVTS 66
            |.:.:||.||..||:.::.|.::..::||        :|:|..:......|..:. :||:|:...
Zfish     8 CTKCIKYMLFFFNFIFWLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYI-SVYILIAVG 71

  Fly    67 IIICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALY 131
            .::..|.||||.||.:|.:|||.|:|..:.|:|...:..|:.|::.::::.       :..:..|
Zfish    72 AVMMFVGFLGCYGAIQESQCLLGTFFACLVLLFACEVAAGIWGFMNKDKIS-------KEVIGFY 129

  Fly   132 GS------------RREITQAWDLTQERLQCCG--------VDTWHDWNRYGPVPESCCQELFGG 176
            .|            :...|....:..|.|||||        ||.|        :.::|.:.|   
Zfish   130 DSVYDKGATYNTDNKNPATAVLKVFHETLQCCGKGNLFTAIVDRW--------LTDTCPEHL--- 183

  Fly   177 QRKECTIFPTITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
                      .||..:  |.....|...|..::||..::.||::|||.||||.:|
Zfish   184 ----------RTNAVD--CHTEIKNLFTDKISLIGIAALVVAVIMIFEMIFSMVL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 62/245 (25%)
NET-5_like_LEL 110..207 CDD:239418 19/116 (16%)
cd81aNP_571593.2 Tetraspanin 12..228 CDD:459767 62/245 (25%)

Return to query results.
Submit another query.