DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and tspan3b

DIOPT Version :9

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001076335.1 Gene:tspan3b / 569864 ZFINID:ZDB-GENE-070424-42 Length:253 Species:Danio rerio


Alignment Length:249 Identity:59/249 - (23%)
Similarity:114/249 - (45%) Gaps:40/249 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFC----LTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSI 67
            |..||.....::.:...:||...|.:.|    ....|..|.....|.:.|  |..|:.::.|.::
Zfish     1 MGQCGVISSKTVLVFLNLIFWAAAGILCYIGAYVFITYDDYDHFFEDIYT--FIPAMVIIAVGTL 63

  Fly    68 IICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALY- 131
            :. ::.|:||....:|.:|.|:|:..::.|||.|.::..||||::|.:|:..:...::.....| 
Zfish    64 LF-VIGFIGCCATIRESRCGLVTFSAVLLLVFATEVVVVVLGYIYRAKVEAVVNHSIQKVYNEYK 127

  Fly   132 GSRREI-TQAWDLTQERLQCCGVDTWHDW--------NRYGPVPESCCQELFGGQRKECTIFPTI 187
            |:..:. ::|.|..|.:|.|||:..:.||        ::...||.|||:             |||
Zfish   128 GTNTDAPSRAIDYVQRQLHCCGIHNYSDWMNTHWFIESKNNSVPVSCCK-------------PTI 179

  Fly   188 TN----------LYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
            :|          ||.:||..:....::|....:...::..|.:.:.|::.:|::
Zfish   180 SNRTGTLMRPGDLYPEGCEVLVVKKLKDIMLYVILAALTFAAIQMLGLLCACVV 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspannin 14..231 CDD:395265 56/240 (23%)
tspan3bNP_001076335.1 Tetraspannin 10..237 CDD:278750 56/240 (23%)
Tweety_N <58..>94 CDD:299916 9/36 (25%)
TM4SF8_like_LEL 104..209 CDD:239416 29/117 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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