DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp74F and prph2lb

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_001104664.1 Gene:prph2lb / 567873 ZFINID:ZDB-GENE-041001-147 Length:359 Species:Danio rerio


Alignment Length:263 Identity:60/263 - (22%)
Similarity:99/263 - (37%) Gaps:65/263 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LFIANFVIFVGGAIVFCLTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSIIICLVSFLG------ 76
            |::.|:|..|.|..:|.:.|:..|:.....||:...:.| ...:|:...:..|.::|||      
Zfish    20 LWVLNWVSVVTGVTLFSMGLFLKVEIEKRRELMSKEIDS-VPNMLICVGLTACAINFLGGKICYD 83

  Fly    77 CVGAGKEV--KCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALY-----GSR 134
            ||...|.:  |.|:|.|..........:|:|.::.|..|:.:::::...:|..|..|     ..|
Zfish    84 CVDTTKFLRWKLLMLPYITCTFFFTFCILVGALMCYSMRKDLEESLYFGLRDAMRYYKDTDMPGR 148

  Fly   135 REITQAWDLTQERLQCCGVDTWHDW-------NRY----------------------GPVPESCC 170
            ..|.:..|:.|.:.||||...:.||       |||                      ..||.|||
Zfish   149 CYIKRTMDMLQMQFQCCGNGGYRDWFHIQWISNRYLNLSNSDVVERIRSNVEGKYLIDGVPFSCC 213

  Fly   171 QELFGGQRKECTIFPTIT---------------NLYNQGCLYVTTNFIRDHAAVIGGTSIAVAIL 220
                |.......|...||               ||..:|||..   .:..:..::....:.|.|:
Zfish   214 ----GLYSPRPCIQHQITNNSAHYNYDYLKEDLNLNRRGCLQA---LLEHYTQIMQSIGLIVLII 271

  Fly   221 MIF 223
            .:|
Zfish   272 WLF 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 60/263 (23%)
NET-5_like_LEL 110..207 CDD:239418 32/145 (22%)
prph2lbNP_001104664.1 Tetraspanin 16..>166 CDD:459767 36/146 (25%)
peripherin_like_LEL 119..261 CDD:239415 32/148 (22%)

Return to query results.
Submit another query.