DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp74F and Tspan3

DIOPT Version :10

Sequence 1:NP_524132.1 Gene:Tsp74F / 39995 FlyBaseID:FBgn0036769 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_062767.3 Gene:Tspan3 / 56434 MGIID:1928098 Length:253 Species:Mus musculus


Alignment Length:240 Identity:61/240 - (25%)
Similarity:110/240 - (45%) Gaps:22/240 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MDCCGQFVKYSLFIANFVIFVGGAIVFC----LTLWTLVDRSFVNELLGTNLFSGAVYVLLVTSI 67
            |..||.....::.:...:||.|.|.:.|    ....|..|.....|.:.| ||...  |::....
Mouse     1 MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYT-LFPAV--VIIAVGA 62

  Fly    68 IICLVSFLGCVGAGKEVKCLLLTYFIIVALVFVTMLIGGVLGYVFRERVQQTMRQEMRSTMALYG 132
            ::.::..:||....:|.:|.|.|:..|:.|||||.::..|||||:|.:|:..:.:.::.....|.
Mouse    63 LLFIIGLIGCCATIRESRCGLATFVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYN 127

  Fly   133 SRRE--ITQAWDLTQERLQCCGVDTWHDW--------NRYGPVPESCCQELFGGQRKECT-IFPT 186
            ....  .::|.|..|.:|.|||:..:.||        .:...||.|||:|    ..|.|. ....
Mouse   128 GTNSDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRE----TAKSCNGSLAN 188

  Fly   187 ITNLYNQGCLYVTTNFIRDHAAVIGGTSIAVAILMIFGMIFSCLL 231
            .::||.:||..:....:::....:...::|.|.:.:.||:.:|::
Mouse   189 PSDLYAEGCEALVVKKLQEILMHVIWAALAFAAIQLLGMLCACIV 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp74FNP_524132.1 Tetraspanin 14..233 CDD:459767 58/233 (25%)
NET-5_like_LEL 110..207 CDD:239418 26/107 (24%)
Tspan3NP_062767.3 Tetraspanin 9..235 CDD:459767 58/232 (25%)
TM4SF8_like_LEL 104..210 CDD:239416 27/109 (25%)

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